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SCNpilot_cont_300_bf_scaffold_1121_curated_6

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(4444..5169)

Top 3 Functional Annotations

Value Algorithm Source
High-affinity branched-chain amino acid transport, ATP-binding protein n=38 Tax=Bordetella RepID=F4LA28_BORPC similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 234.0
  • Bit_score: 287
  • Evalue 1.60e-74
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEJ93897.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter pseudonitzschiae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.5
  • Coverage: 234.0
  • Bit_score: 310
  • Evalue 1.90e-81
livF; high-affinity branched-chain amino acid transport ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 234.0
  • Bit_score: 287
  • Evalue 5.20e-75

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Taxonomy

Sulfitobacter pseudonitzschiae → Sulfitobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
ATGAGTGATAAAGAAGCGTTGCTGTCGGTCGTCGATGCGAAGTCCTGCTATGGCCGCGTCGAGGTGCTGCACGGCATATCGCTGGACGTCTTCGAAGGCGAGGTGGTCGCCATCATCGGTGCAAACGGGGCTGGCAAGACCACCTTGATGCGAACCATCTCTGGCGTCCAGGATCTGTCTGCCGGCAGCATGCGATTCGCCGGCGAGTCGCTCGATCGCGTGCCCGCACATCGCCGCATCAGTCGGGGCATTGCGCAGGTGCCTGAGGGGCGACACGTTTTTCCATCGCTGTCCGTCGAGGACAACCTTCAACTCGGCGCGTGGTCCCTCAGTCGAGTTCAGCGTCGCGAGCGTGCGCGCATGGACTGGGCCTACCAAGCTTTTCCCATCCTTCATGAAAAGCGCAGCATCGCCGCGGGCCGGCTGTCCGGGGGCCAACAGCAAATGGTGGCGATCGCCCGTGCCATGATGGTCCGACCGAGGCTTCTTCTGCTGGACGAACCCAGTATGGGCTTGGCTCCGCTGATCGTGAAGCAGGTATTCGAGGCGCTCCATGCGCTCAAGCAGCAAGGCATGACCATTCTCCTGATCGAGCAGAACGCGACGCTTGCACTCGAGTTCGCGAACCGCGCCTACGTCATGGAAACAGGGTCCGTGACGCTCGAAGGGCCCGCGGCAGCGGTCCGCGCCGATCCGCGCGTTCAAGCCTCGTATCTCGGATCCTAA
PROTEIN sequence
Length: 242
MSDKEALLSVVDAKSCYGRVEVLHGISLDVFEGEVVAIIGANGAGKTTLMRTISGVQDLSAGSMRFAGESLDRVPAHRRISRGIAQVPEGRHVFPSLSVEDNLQLGAWSLSRVQRRERARMDWAYQAFPILHEKRSIAAGRLSGGQQQMVAIARAMMVRPRLLLLDEPSMGLAPLIVKQVFEALHALKQQGMTILLIEQNATLALEFANRAYVMETGSVTLEGPAAAVRADPRVQASYLGS*