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SCNpilot_cont_300_bf_scaffold_250_curated_17

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(20830..22086)

Top 3 Functional Annotations

Value Algorithm Source
MFS transporter n=1 Tax=Variovorax paradoxus RepID=UPI00036B50F6 similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 418.0
  • Bit_score: 720
  • Evalue 1.00e-204
major facilitator superfamily protein similarity KEGG
DB: KEGG
  • Identity: 84.9
  • Coverage: 411.0
  • Bit_score: 706
  • Evalue 4.70e-201
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACS18019.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 411.0
  • Bit_score: 706
  • Evalue 2.10e-200

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1257
ATGCCCGGCGACAACGACGCCCCCATACGCGGGTGGCTCGCGCTGCTGTGCGCGAGCCGCCTGCTGCAGGCCATGATCGTCACGGCCTACTCCGGCGTGCTGCCTTTCATGATGGCCGACTGGCACATGACGGCGGCGCAGGCCGGCTCCATACAGAGCGCATGGCACATCGGCTACATGAGCTCGCTGTTCGCGGTGGGCCTGCTGGCCGACCGCTACGGGCCGCACCGCATCTTCTTCGCCGGCAGCGCCGTGAGTTCGATGGCGGCGCTGGCCTTCGCGCTGTTCGCGCACGACCACCTGTCGGCCATGCTGCTCTACGGCCTGGCGGGCCTGTGCGCCGGGGCCTCGTACACGCCGGGCCTGCAGCTGCTGGCGCGCAACACCCAGCCGGCGGTGCGCGGGCGGGCGATGGGGCTGTTCATCGGCGCATCGTCGATGGGCTATGCGCTGTCGCTCGCGGTGGTGGCCGCGTTCAGCCATGCGCGGCACTGGCCGCTGGGGCTGTTGGCGGCGGCGTGCTGCACCGTGGCTGGCGCGCTGCTCACGGTGCTGGCACTGCGGCGCATGCGCCCGCCTTCCGCGCCGTTGCCGCACGCCGAGCGCGAAGGCACCTGGCAGGCGCTGCGCGCCACGGTGCACGACAAGCCGGCCATGGCCGGCAACTGGGCCTACGCCTTCCACTGCTGGGAACTCATGGCGCTGTGGGCATGGCTGCCGGCCTACCTGATGGCCTCGTCGGGCGAGGCATCGTCGTCGTGGCAGGGCGCGGGCGTCGCGCTGGCGGCGCTGGCCCACCTCGTCAGCGTGTTCGGCAGCGTGGCGGGCGGTGCAGCGTCGGACCGGCTCGGGCGGGCGCGGGTGATGATGGCCGCGACGCTCGCGAGCCTCTTCATGTCCTTCGCGTTCGGCTGGATGTGGACCTGGCCGCTGTGGCTGTTGGCCGCGATGGCCGCCGTCTACAACCTCTGCGCCATCGCCGATTCGTCGGTCTACTCCACCGCGCTGGCCGATGTGGTGGCGCCGCACCGGCTGGGCGTCGCGTTCTCGGTGCGATCGGTGATGGGCTTCGGCGCCGGCGCCCTCAGCCCCTGGGTGTTCGGCCTCGCGCTCGACTGGGGCCAGACGCGCTTCGGCATCGGCAGCACGCAGGGCTGGGTGGCGGCCTGGAGCTCGGTCGGCCTGGGCGCGCTGCTGGGGCCGTGGATGATCGCGCGCTTCTCACGGCTGCACCGCGCGCGCGTGGCGGTTCACTGA
PROTEIN sequence
Length: 419
MPGDNDAPIRGWLALLCASRLLQAMIVTAYSGVLPFMMADWHMTAAQAGSIQSAWHIGYMSSLFAVGLLADRYGPHRIFFAGSAVSSMAALAFALFAHDHLSAMLLYGLAGLCAGASYTPGLQLLARNTQPAVRGRAMGLFIGASSMGYALSLAVVAAFSHARHWPLGLLAAACCTVAGALLTVLALRRMRPPSAPLPHAEREGTWQALRATVHDKPAMAGNWAYAFHCWELMALWAWLPAYLMASSGEASSSWQGAGVALAALAHLVSVFGSVAGGAASDRLGRARVMMAATLASLFMSFAFGWMWTWPLWLLAAMAAVYNLCAIADSSVYSTALADVVAPHRLGVAFSVRSVMGFGAGALSPWVFGLALDWGQTRFGIGSTQGWVAAWSSVGLGALLGPWMIARFSRLHRARVAVH*