name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_300_bf_scaffold_250_curated_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
255..1397
|
acyltransferase n=1 Tax=Variovorax paradoxus RepID=UPI00035C4BE9
Variovorax paradoxus strain MEDvA23 contig_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ34617.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_2
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1413..2186)
|
Lysophospholipase L1-like esterase n=1 Tax=Variovorax sp. CF313 RepID=J2KYR4_9BURK
Lysophospholipase L1-like esterase {ECO:0000313|EMBL:EJL78133.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
G-D-S-L family lipolytic protein
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2273..3043)
|
RNA polymerase subunit sigma-70 n=1 Tax=Variovorax paradoxus RepID=UPI000371C17B
anti-sigma k factor rska
Anti-sigma K factor RskA {ECO:0000313|EMBL:ADU35700.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3072..3665)
|
RNA polymerase sigma factor n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2I0_VARPE
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3829..4368
|
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2I1_VARPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU35702.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_6
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4418..5725
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036980AD
Uncharacterized protein {ECO:0000313|EMBL:EJL78137.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5731..7164)
|
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2I7_VARPE
NodT family RND efflux system outer membrane lipoprotein
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ADU35708.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7164..10334)
|
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2I8_VARPE
transporter, hydrophobe/amphiphile efflux-1 (hae1) family; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family {ECO:0000313|EMBL:ADU35709.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10344..11588)
|
Efflux transporter, RND family, MFP subunit n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2I9_VARPE
RND family efflux transporter mfp subunit; K03585 membrane fusion protein
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADU35710.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_10
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11787..13202)
|
Putative membrane protein n=1 Tax=Variovorax sp. CF313 RepID=J2KYR9_9BURK
Putative membrane protein {ECO:0000313|EMBL:EJL78138.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
rhomboid family protein
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_11
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13284..14681)
|
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
argininosuccinate lyase; K01755 argininosuccinate lyase [EC:4.3.2.1]
argininosuccinate lyase n=1 Tax=Variovorax paradoxus RepID=UPI00035F00C8
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14813..15811
|
integral membrane sensor signal transduction histidine kinase; K08082 two-component system, LytT family, sensor histidine kinase AlgZ [EC:2.7.13.3]
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2J2_VARPE
Variovorax paradoxus strain MEDvA23 contig_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ34628.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15808..16563
|
LytTR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI000364176F
two component transcriptional regulator, LytTR family
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:AGU48567.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_14
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16560..17840
|
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2J4_VARPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU35715.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_15
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17980..20340
|
Putative uncharacterized protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2S6U5_HAHCH
Uncharacterized protein {ECO:0000313|EMBL:KFE66133.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_16
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20441..20836
|
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2J6_VARPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU35717.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_17
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20830..22086)
|
MFS transporter n=1 Tax=Variovorax paradoxus RepID=UPI00036B50F6
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACS18019.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_18
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22095..22619)
|
phosphinothricin acetyltransferase; K03823 phosphinothricin acetyltransferase [EC:2.3.1.183]
GCN5 family acetyltransferase n=1 Tax=Variovorax paradoxus RepID=UPI00036A486E
Phosphinothricin acetyltransferase {ECO:0000313|EMBL:ADU35719.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_19
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22668..23591
|
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2J9_VARPE
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADU35720.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_20
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23608..24864)
|
Arabinose efflux permease family protein n=1 Tax=Variovorax sp. CF313 RepID=J2KD52_9BURK
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJL78145.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
major facilitator superfamily protein
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_21
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25033..25578)
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CTY4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL78146.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_22
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25575..25976)
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2TI06_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL78147.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
Gfa-like protein
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_23
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26041..34206)
|
Cellobiose phosphorylase n=1 Tax=Variovorax sp. CF313 RepID=J2K3D4_9BURK
Variovorax paradoxus strain MEDvA23 contig_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ34596.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
putative carbohydrate-binding glycosyltransferase
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_24
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34203..34421)
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2SQF9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL67772.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34588..37431)
|
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.1.1.31 {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769};; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
Phosphoenolpyruvate carboxylase n=1 Tax=Variovorax sp. CF313 RepID=J2KYS8_9BURK
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_26
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
37547..38440
|
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
porphobilinogen deaminase; K01749 hydroxymethylbilane synthase [EC:2.5.1.61]
Porphobilinogen deaminase n=1 Tax=Variovorax sp. CF313 RepID=J3CTF9_9BURK
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_27
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
38457..39227
|
uroporphyrinogen iii synthase hem4; K01719 uroporphyrinogen-III synthase [EC:4.2.1.75]
Uroporphyrinogen III synthase HEM4 n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2K4_VARPE
Variovorax paradoxus strain MEDvA23 contig_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ34592.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_28
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
39224..40318
|
hypothetical protein; K02496 uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
Putative enzyme of heme biosynthesis n=1 Tax=Variovorax sp. CF313 RepID=J3CTY8_9BURK
Putative enzyme of heme biosynthesis {ECO:0000313|EMBL:EJL78151.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_29
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
40326..41609
|
Putative enzyme of heme biosynthesis n=1 Tax=Variovorax sp. CF313 RepID=J2TI09_9BURK
Putative enzyme of heme biosynthesis {ECO:0000313|EMBL:EJL78152.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hemy domain-containing protein; K02498 HemY protein
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_30
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(41616..43184)
|
MFS transporter n=1 Tax=Variovorax paradoxus RepID=UPI000367B3FA
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADU35728.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|