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SCNpilot_cont_300_bf_scaffold_250_curated_26

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 37547..38440

Top 3 Functional Annotations

Value Algorithm Source
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 297.0
  • Bit_score: 531
  • Evalue 8.60e-148
porphobilinogen deaminase; K01749 hydroxymethylbilane synthase [EC:2.5.1.61] similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 297.0
  • Bit_score: 520
  • Evalue 2.60e-145
Porphobilinogen deaminase n=1 Tax=Variovorax sp. CF313 RepID=J3CTF9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 297.0
  • Bit_score: 531
  • Evalue 6.20e-148

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
GTGATCGCCACGCGCGAAAGCCGGCTGGCCTTGTGGCAAGCCGAACACGTGCAGGCGCTTCTGCAGGAAAGAGGCCACACGGTCAGCCTGCTGGGCATCACCACCACCGGCGACCAGATCCTCGACCGCACGCTGAGCAAGGTGGGCGGCAAGGGCCTGTTCGTGAAGGAACTGGAACTCGCGCTCGAAGAAGGGCGCGCCGACATCGCCGTCCATTCGCTCAAGGACGTGCCGATGGATCTTCCCCAAGGCTTCGCGCTGCCTTGCGTGCTGGAGCGCGAAGACCCGCGCGACGCGCTCGTCTCCCCCCGTTTTGCCTCGCTCGACCAACTGCCGCGGGGCGCGGTGGTCGGCACCTCCAGCCTGCGCCGTGTGGCGCTGCTGCGCGCGCTGCGGCCCGACCTGCGCATCGAGCCGCTGCGCGGCAATCTCGACACCCGCCTGCGCAAGCTGGACGAAGGCCAGTACGACGCCATCGTGCTGGCGGCCGCCGGACTCAAGCGGCTGGGGCTCGAAAGCCGCATCCGCGTGGCCTTCGATCCCGACACCATGCTGCCCGCAGCGGGGCAGGGCGCCCTGGGCGTCGAGGTGCGGGCGGACCGCGCCGACCTCATCGAACTGCTTGCTTCCATCACCCACAGGGGCGACTGGCTTTCCACCGCCGCCGAGCGCGCCGTGAGCCGTGCCATGGGCGGCAGCTGCTCCATGCCGCTGGCGGCCCATGCCCGCTGGCAGGCCGACGGCGCGCTGCGCATCGATGCCGCCTGGGGCGACCCCGAAGGCAAGGCGCCGCTGGTGAAGGTGCATGCATTGGCGCAGGCCGGCGACTTCACGCAAGCCGACGCGCTCGGCCAACACGCCGCCGCCTTGCTGCGCGAGGCCGGGGCCCACTGA
PROTEIN sequence
Length: 298
VIATRESRLALWQAEHVQALLQERGHTVSLLGITTTGDQILDRTLSKVGGKGLFVKELELALEEGRADIAVHSLKDVPMDLPQGFALPCVLEREDPRDALVSPRFASLDQLPRGAVVGTSSLRRVALLRALRPDLRIEPLRGNLDTRLRKLDEGQYDAIVLAAAGLKRLGLESRIRVAFDPDTMLPAAGQGALGVEVRADRADLIELLASITHRGDWLSTAAERAVSRAMGGSCSMPLAAHARWQADGALRIDAAWGDPEGKAPLVKVHALAQAGDFTQADALGQHAAALLREAGAH*