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SCNpilot_cont_300_bf_scaffold_250_curated_27

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 38457..39227

Top 3 Functional Annotations

Value Algorithm Source
uroporphyrinogen iii synthase hem4; K01719 uroporphyrinogen-III synthase [EC:4.2.1.75] similarity KEGG
DB: KEGG
  • Identity: 84.2
  • Coverage: 260.0
  • Bit_score: 431
  • Evalue 1.40e-118
Uroporphyrinogen III synthase HEM4 n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2K4_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 84.2
  • Coverage: 260.0
  • Bit_score: 431
  • Evalue 4.40e-118
Variovorax paradoxus strain MEDvA23 contig_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ34592.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 260.0
  • Bit_score: 434
  • Evalue 1.20e-118

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 771
ATGACCGCCCGTCCCGTCATCGTCACCCGCCCCGAGCGCGAGGCGGCGCAGTGGGTGAGCGAGCTGCGCGCCGCGGGGCTCGACGCGGTGGCATTGCCGCTGATCGTGATCGCGCCGGTGGCGGATGCGCAGCCGCTGCGCGCCGCCTGGCAAAGGCTGGGCAGCTATGCGGCGCTGATGTTCGTGAGCGCCACCGCGGTCGAGCATTTCTTCCAGCATGAAGCACCGGGCATGACGGCCGGCCGCCGCTTCTGGGCCACGGGCCCGGGCACCACGCGCGCCTTGCTGCGCTCGGGCGTGCCGCCGGAACAGATCGACGCACCGCCGCCCGAAGCCACGCGCTTCGATTCCGAGGCGCTGTGGGAGCGCGTGCAAGGCCAGGTGACGGCCGGCGTGCGCGTGCTGATCGTGCGAGGCGGCGACGACTCCGGGCAGCCCGCGGGCCGCGACTGGCTGGCCAGGGAAATCGACGCCGCGGGCGGCTTGCGCGACACCGTGGTCGCCTACCGGCGCCTGCCGCCGTCGCTGGACGTCGTACAACTGCGGATCGCAACGGACGGTGCGCAAGGCCGCGCGATCTGGCTCTTCAGCAGTTCCGAAGCCATCGGCAATCTGCAGCGCGCGATGCCCGGCACCGACTGGCATGCGGCAAGCGCTGTCGCCACGCATGCACGCATCGGCGAAGCCGCGCGCGCCGCGGGTTTCGGGGCGTTGCGTGTGTGCACACCGTTGCAGGATGCGTTGATCGCGTCGATAGAATCCCTCGCATGA
PROTEIN sequence
Length: 257
MTARPVIVTRPEREAAQWVSELRAAGLDAVALPLIVIAPVADAQPLRAAWQRLGSYAALMFVSATAVEHFFQHEAPGMTAGRRFWATGPGTTRALLRSGVPPEQIDAPPPEATRFDSEALWERVQGQVTAGVRVLIVRGGDDSGQPAGRDWLAREIDAAGGLRDTVVAYRRLPPSLDVVQLRIATDGAQGRAIWLFSSSEAIGNLQRAMPGTDWHAASAVATHARIGEAARAAGFGALRVCTPLQDALIASIESLA*