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SCNpilot_cont_300_bf_scaffold_250_curated_10

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(11787..13202)

Top 3 Functional Annotations

Value Algorithm Source
Putative membrane protein n=1 Tax=Variovorax sp. CF313 RepID=J2KYR9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 471.0
  • Bit_score: 846
  • Evalue 1.80e-242
Putative membrane protein {ECO:0000313|EMBL:EJL78138.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 471.0
  • Bit_score: 846
  • Evalue 2.50e-242
rhomboid family protein similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 474.0
  • Bit_score: 773
  • Evalue 4.60e-221

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1416
ATGACGGTGCTGCTGATCCTCCTGAACATGATCGTGTTCTGGGGGCCGCAGCGCAGCGAAGAGAACGCGCGGGAGCGCGCCGCCGACTATTACGTCAAGAGCGTGCTGCCCGCGCTGGAGTTGCCGCCCTTCGTCGAATGGCTGGAAAAGGCAGATCCCAAGCGCGGCAAGCTGGCCCGCCGCATGCTGCCGCACGAAGAGGCCTATCCGCAGTTGCTCGAAGGCATGCAGGGTGAAAAGCAGTTCATGCGGAAACTGCAGGCCGACGAAGTCGTCACGCCAACCGACCCGCAATACGGCGAGTGGAAGCGCGACCGCCAGCACTACGAGGCGATGCTTCCCGAGCCGTTCACCCGGCGCTGGTCGCACGACCACGGCAAGGACGCCGAGTTCAGGCCCTGGACCTGGATCACCTCGGCCTTCCTGCACGGCAGCACCAGCCACCTGCTGGGCAACATGCTGTTCCTTTTTCTGTTCGGCTTTTCGGTCGAGCTGGCGCTGGGGCGCGGCACCTACCTGAGCTTCTACCTGCTGGGCGCGCTGGGCGCCTCGCTGCTGGCCGGCTGGGCCTATGCCGGCAAGGGCAGCTACGGGCTCGGCGCCTCGGGCGCGATCTCGGCGCTGATGGGCATGTACGCGGTGATGTACCGGCTCAGGCGCATCCGCTTCTTCTACCAGCTGTTCTTCTATTTCAACTACGTCACCGCGCCGGCGCTCCTGCTGCTGCCGGCATGGATCGCCAACGAGCTGATGCAGCACTGGCTGGGCGGCCAGGGCATCGCCTACATGGCCCACCTGGGCGGGCTGCTGACCGGCGCCGCGCTGATGGCCGGCGCGCTGCTGCTGCGCCGGGTGAAAGCCCCTGAAACGGCCTCCGCCCCGGAACCCGACCGCTTCGACGAGCACGTGGCCGCCGCCCAGAAGTACGGCGCCGCGATGAAGTTCGACCGCGCCTGCGCCGAATGGCGCGCCGCCGCGGCCCTGCGCCCCGGCGACACCGGCACGCTGCGCGCCTGGTTCAACACCGCGCGGCTGCAGCCCGCGAGCGACGACTTCCACCATGCCGCGCGCCGCATCTTCCGCCTGCCCGCCACCGATCCGGCCACGCTCGCGCTGCAGCACGCCAGCTACAAGACCTACCTCGACCAGGCCAAGCCCGGCGCGCGCCTGAAGCCCGACGACATGGCGCGGCTCGCGCGACGCTTCGCGCGCATCCGCGAGTTCGGCGATGCCGACAAGCTCTGCCGCATCCTGCTGAAGACCGCGCCCGACCACGCCGAGCTGCCCGATACGCTCTCGGCCTGCGCCAACGGCCTGCTGCACGCGGGCGAACGCGACCGCGCCGTGAGCCTGCTGCCCGACCTGCTGCGCCTGGCGCCCAACGACATGGTGACGCGCGCCCTGCAGCGCGCCTGA
PROTEIN sequence
Length: 472
MTVLLILLNMIVFWGPQRSEENARERAADYYVKSVLPALELPPFVEWLEKADPKRGKLARRMLPHEEAYPQLLEGMQGEKQFMRKLQADEVVTPTDPQYGEWKRDRQHYEAMLPEPFTRRWSHDHGKDAEFRPWTWITSAFLHGSTSHLLGNMLFLFLFGFSVELALGRGTYLSFYLLGALGASLLAGWAYAGKGSYGLGASGAISALMGMYAVMYRLRRIRFFYQLFFYFNYVTAPALLLLPAWIANELMQHWLGGQGIAYMAHLGGLLTGAALMAGALLLRRVKAPETASAPEPDRFDEHVAAAQKYGAAMKFDRACAEWRAAAALRPGDTGTLRAWFNTARLQPASDDFHHAARRIFRLPATDPATLALQHASYKTYLDQAKPGARLKPDDMARLARRFARIREFGDADKLCRILLKTAPDHAELPDTLSACANGLLHAGERDRAVSLLPDLLRLAPNDMVTRALQRA*