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SCNpilot_cont_300_bf_scaffold_250_curated_12

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 14813..15811

Top 3 Functional Annotations

Value Algorithm Source
integral membrane sensor signal transduction histidine kinase; K08082 two-component system, LytT family, sensor histidine kinase AlgZ [EC:2.7.13.3] similarity KEGG
DB: KEGG
  • Identity: 93.1
  • Coverage: 332.0
  • Bit_score: 606
  • Evalue 4.10e-171
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2J2_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 332.0
  • Bit_score: 606
  • Evalue 1.30e-170
Variovorax paradoxus strain MEDvA23 contig_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ34628.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.7
  • Coverage: 332.0
  • Bit_score: 611
  • Evalue 5.60e-172

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 999
TTGCGCGGGGGGCCGTCGCTGTTCGACGCCTGCCGCATCGGCGTGGTTCTGCGCACGGTGGTGTTCGTCGAGGCGGTGGTGGCCATTGCCACGCTGTTCGTGGTTTCCACGCCGACCGAATGGCTGGTGCAGGCGGCCACCGTCACCGGCGGGGCCTTGCCCGCGACCCTGCTGTGGCTGGTGGCGACCTGCGGACTCAAGAAGCCGCTGCGGCGGCTGCCGCGCCAATGGCAGTACGGGGCGGGCGGGGCGCTCGGGGCCATCGCGGCGCTCTATGGTTGCGGGCTGCTGCGGCTCACCGGGGTGCTGTCGAATGCGCCGTGGCTGGCCAGCGCGCTGACCGGCGCCCTGTTCGCGGGACTGGTGATGGCCGCGATGGTGCTGCGCGCGCGCGGCCAGACGCCCGCCGCCACCACGGCCCGGCTGGAGGAACTGCAGTCGCGCATCCGTCCGCACTTTCTGTTCAACACGCTCAACAGTGCCATCGCGCTGGTGCGCGAGGAGCCGGCCAAGGCCGAGACCATGCTGGAAGACCTGGCCGAGCTGTTCCGCCAGGCGCTGGCCGACCCGGGCGAATCGGGCACGCTGGCCGACGAGATCGCGCTGGCCGAGCGCTACCTGGCCATCGAGCAGGTGCGCTTCGGCGACCGGCTGCGCATTCGCTGGGACCTGGATGCCGCCGCCAGCACTGCCCGGCTGCCGCCGCTTCTGTTGCAGCCGCTGGTCGAGAACGCCATCAAGCACGGCGTGGAGCCCAGCCCCGAGGGCGCCAAGCTGCGCATCCGCACCGAGCGGCGCGGTTCCATGGTGGTGATCGAGGTGGTCAACAGCCTGCCGCCGCTGCGCTGGGCCGACGAGCCGCTGCCGCGCGGCCACGGTATCGCGCTGGCCAATGTGAGAGACCGCCTGCGCCTTCTGCACGATATGCAGATGCAGTTCAGCGCCGGCATGGACCAGAAAAACTACCGGGTGCGTATCGCGATCCCGGCTGAATCATGA
PROTEIN sequence
Length: 333
LRGGPSLFDACRIGVVLRTVVFVEAVVAIATLFVVSTPTEWLVQAATVTGGALPATLLWLVATCGLKKPLRRLPRQWQYGAGGALGAIAALYGCGLLRLTGVLSNAPWLASALTGALFAGLVMAAMVLRARGQTPAATTARLEELQSRIRPHFLFNTLNSAIALVREEPAKAETMLEDLAELFRQALADPGESGTLADEIALAERYLAIEQVRFGDRLRIRWDLDAAASTARLPPLLLQPLVENAIKHGVEPSPEGAKLRIRTERRGSMVVIEVVNSLPPLRWADEPLPRGHGIALANVRDRLRLLHDMQMQFSAGMDQKNYRVRIAIPAES*