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SCNpilot_cont_300_bf_scaffold_250_curated_30

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(41616..43184)

Top 3 Functional Annotations

Value Algorithm Source
MFS transporter n=1 Tax=Variovorax paradoxus RepID=UPI000367B3FA similarity UNIREF
DB: UNIREF100
  • Identity: 82.3
  • Coverage: 524.0
  • Bit_score: 852
  • Evalue 2.80e-244
major facilitator superfamily protein similarity KEGG
DB: KEGG
  • Identity: 79.7
  • Coverage: 512.0
  • Bit_score: 819
  • Evalue 4.80e-235
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADU35728.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 512.0
  • Bit_score: 819
  • Evalue 2.10e-234

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1569
ATGTCTCTCTCCCACACCGGCAGGAACCGGGTCGCGCTGGCCGCGATTTCGCTGATCGCCCTCATGTTCGGCCTGGAAATCTCCAGCGTGCCGGTCATTCTTCCCACGCTCGAAAAAGAACTGCAGGGCGATTTCAGCGACATGCAGTGGATCATGAACGCCTACACCATCGCCTGCACCACGGTGCTGATGGCCGCGGGCACGCTGGCCGACCGCTACGGCCGCAAGCGCATCCTCATCATCGGCATCGTGCTGTTCGGCATCACCTCGCTGATCTGCGGGCTCTCGCAGAGCGCGTGGCTGCTCATCGTCAGCCGCTTCCTGCAGGGCCTGAGCGGCGGCGCGATGCTGATCAGCCAGCTCGCGGTGCTCTCCCACCAGTTCCAGCAGGGCAAGGAGCGCAGCAAGGCCTTCGCCATCTGGGGCGTGGTCTTCGGCATGGGGCTGGGCTTCGGGCCGATCGTCGGCGGCGCCATCGTCGCGCTGTCGAACTGGCAGTGGGTGTTCCTGGTCCACGCTCCGCTGGCCGCCGTGGCGCTCGCCCTGGTGCTCGGCAGCGTGAGCGAGTCCAGCGACCCCGACGCGCAGCGGCTCGACCTTCCGGGCATCGTCACGCTGTCGCTCGCGGTGCTGGGGCTGACCTACTTCATCACGCAGGGGCCGGGCATCGGCTTCGGCAGTCCGCTGGCGCTGGGCATCCTCGGCGCGTCGGCCGCGAGCTTCGCGGTCTTCGTTTGGGTCGAGATCATCAATCCGCATCCGATGTTCGATTTCTCGGTGTTCCGCATCCGCAATTTCTCGGGCGCGCTGATCGGCTCGGCCGGCATGAACTTCAGCTTCTGGCCTTTCATGATCTACCTGCCGATCTACTTCCAGGGCGCCCTGGGCTACGACGCGGTCACCGCCGGCTCCGCCCTGCTGGCCTACACGCTGCCCACGCTGGTAATGCCGCCGGTGGCGGAGCGGATGTCGCTGCGCTGGCGACCCGGCGTGGTCATTCCCCTGGGCCTCTTCGTCATCGGGCTGGGCTTCATGGCGATGCGCCTGGGCAGCGGCATGGCGGATGCGAGCTGGATCACCATGCTCCCCGGCTGCCTGCTGGCCGGCATCGGGCTGGGCCTGACGCACACGCCCGTCACCAACACCGCGACCGGCTCGGTGCCGAGCACGCGCGCCGGCATGGCCTCGGGCATGGACATGAGCGCACGGCTGATTACGCTGGCCATCAACATCGCGGTGATGGGCTTCATCCTGCTCGAAGGCGTCCATTCGCACCTGAAGGCCGCGCTGTCCGCATCGCTCGACGCGCCGCAGCTGCGCGCATTGGCGGAGAAGGTCGCGGCCGGCAGCTTCGCGTCACTCGGCGAGAGCTTTCCGGTGCTGTCGCAGGTGGACCCGTCAGGCGCCACCGTGCACGCGGCGCTGATGCACAGCTTCGGCTGGGTGATGCTCTTCGGTGCGATCGGCGTGTGGGTGCTGGCCGGGGTCAGCCTGCTGGTCTTCGGCAATGGCCGGCTGCCGGTGCCGGCCTGCGGATTGAAGGCGGCGAAGGAATCCGCCTGTTCCTGA
PROTEIN sequence
Length: 523
MSLSHTGRNRVALAAISLIALMFGLEISSVPVILPTLEKELQGDFSDMQWIMNAYTIACTTVLMAAGTLADRYGRKRILIIGIVLFGITSLICGLSQSAWLLIVSRFLQGLSGGAMLISQLAVLSHQFQQGKERSKAFAIWGVVFGMGLGFGPIVGGAIVALSNWQWVFLVHAPLAAVALALVLGSVSESSDPDAQRLDLPGIVTLSLAVLGLTYFITQGPGIGFGSPLALGILGASAASFAVFVWVEIINPHPMFDFSVFRIRNFSGALIGSAGMNFSFWPFMIYLPIYFQGALGYDAVTAGSALLAYTLPTLVMPPVAERMSLRWRPGVVIPLGLFVIGLGFMAMRLGSGMADASWITMLPGCLLAGIGLGLTHTPVTNTATGSVPSTRAGMASGMDMSARLITLAINIAVMGFILLEGVHSHLKAALSASLDAPQLRALAEKVAAGSFASLGESFPVLSQVDPSGATVHAALMHSFGWVMLFGAIGVWVLAGVSLLVFGNGRLPVPACGLKAAKESACS*