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SCNpilot_cont_300_bf_scaffold_250_curated_19

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 22668..23591

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2J9_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 303.0
  • Bit_score: 525
  • Evalue 3.50e-146
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 303.0
  • Bit_score: 525
  • Evalue 1.10e-146
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADU35720.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 303.0
  • Bit_score: 525
  • Evalue 4.90e-146

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGCAAGGCATAAGAAATACTTTGGAAAAAACGCTCAACCTCGACCAGCTTCGCTCCTTCGCGCTGGTGATCGAAACCGGCAGCTTCTCCGCCGCGGCCGACCGGCTCGGCATCTCGCAGCCGGCCGTGAGCCTGCAGGTGCGCCAGCTCGAACGCCGGCTGTCAGTGCGGCTGATCGAGCGCGTCGGCAAGCGCGCCAAGGCCACGCCGGCGGGCATGGAGCTGCTGCGGCATGCGCAGCACATCGCAACCGCCGTGGACAACGCTGTCGATGCGCTGGCCGATCACGCCAGCGGCGTCACCGGCCGCGTGCGGCTGGGCACGGGCGCGACGGCCTGCCTGCACTTCCTGCCGGCGGTGCTGCGCACGCTGCGCGAACAGTTCCCGGCGCTCAGCGTGGTGGTGAGCACGGGCAACACCGAAGACCAGGCGCGCAAGGTCGAGGAAAACAGCCTCGACCTCGCGCTGGTCACGCTGCCCGTGGCGGGCCGCGCGCTGGAGGCGATGCCGGTGCTGGAGGACGAGTTCGTCGCCATCGGTCGCGCGGATGTCGCGCCGCTGAAGGCGCGCGTGACGCCGGCCGACCTGGGCGCGCTGCCATTGGTGCTGTTCGAGCCCGCGGCCAACACGCGCAAGCTGGTCGACCGCTGGTTTGCCGCCGGAGGGCTGCAGCCGCAGCCCGTGATGGAGCTGGGCAGCGTCGAGGCGATGAAGGAAATGGTGGCGGCGGGGCTGGGCCATGCCATCGTGCCGGGCATGTCGATGACGGGGCGCGGCGCCCACCCCGACCTGAAGACCAGCCGGCTGAACCCCCGCATGCACCGCACGCTGGCCGTCGTGCTGCGGCGGGACAAGCCCGTGAACAAGGCCCTGCGCGTGGTGCTCGATGCCATCGTGGCGGCCGGCAAGCCCGGCCGCCGCTAG
PROTEIN sequence
Length: 308
MQGIRNTLEKTLNLDQLRSFALVIETGSFSAAADRLGISQPAVSLQVRQLERRLSVRLIERVGKRAKATPAGMELLRHAQHIATAVDNAVDALADHASGVTGRVRLGTGATACLHFLPAVLRTLREQFPALSVVVSTGNTEDQARKVEENSLDLALVTLPVAGRALEAMPVLEDEFVAIGRADVAPLKARVTPADLGALPLVLFEPAANTRKLVDRWFAAGGLQPQPVMELGSVEAMKEMVAAGLGHAIVPGMSMTGRGAHPDLKTSRLNPRMHRTLAVVLRRDKPVNKALRVVLDAIVAAGKPGRR*