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SCNpilot_cont_300_bf_scaffold_250_curated_8

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(7164..10334)

Top 3 Functional Annotations

Value Algorithm Source
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2I8_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 999.99
  • Bit_score: 1880
  • Evalue 0.0
transporter, hydrophobe/amphiphile efflux-1 (hae1) family; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 999.99
  • Bit_score: 1880
  • Evalue 0.0
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family {ECO:0000313|EMBL:ADU35709.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 999.99
  • Bit_score: 1880
  • Evalue 0.0

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3171
ATGGCTCAGTTCTTCATCGACCGGCCCATCTTCGCGTGGGTGCTTTCCATCGTCGTCATGCTCGCGGGCCTGATGGCCATCCGCACGCTGCCGCTGGAGCAGTACCCCGACATCGCGCCGCCGCGCGTGTCCATCAACGCCACCTACACGGGCGCCTCGGCCAAGACGGTCGAGGACTCCGTCACGCAGGTCATCGAGCAGCAGATGAAGGGGCTGGACAACCTGCTGTACATGCAGTCGACCAGCAACTCGTCGGGCGTGGCGCGGCTGTCGCTCACCTTCGACGCGGGCACCAACATCGACGTGGCGCAGATGCAGGTGCAGAACAAGCTGCAGCAGGCTATGTCGCGCCTGCCGCAGCAGGTGCAAAGCCGCGGCGTCACCGTCACCAAGGGCGGCAACGACTTCCTGATGATCGTCTCGATGTACTCCGGCGACGGCAGCGCCTCGGCGGTGGACGTGGGCGACTACATCTCCAGCAACCTGGTGGACGTGATCAGCCGCATCGACGGCGTGGGCGAAGTGCAGACGCTGGGCACCGGCTACGCCATGCGCCTGTGGCTGGACCCCGACAAGCTGCGCAAGTACGCGCTGATTCCCTCCGACGTGAGCGCCGCCATCACCGCGCAGAACGCGCAGGTCTCCGCCGGCCAGCTGGGCGCGCTGCCCGCGGCCGCCGGGCAGCAGCTCAACGCCACCATCACCGCGCGCAGCAAGCTGCAGACGGCCGAGCAGTTCGAGAACGTGGTGCTGCGCTCCACGCCCGACGGCGCCGTGGTGCGCCTGAAAGACGTGGCGCGCGTGGAACTGGGCGCGGAGAACCTCACGGTGCGCTCGCAGCTCGGCGGCCGGCCCGGCGCCGGCCTGGGCGTGGTGCTGGCCGACGGCGCCAACGCGGTGCAGGTGGCCGAGGCGGTGAAGGCCAGGATCGAGGAGCTCAAGCCGCTCTTTCCCAACCAGCTGCAGACCTTCGTGAGCTACGACACCACGCCCTTCGTGAGCGCCTCCATCGACGAGGTGGTCAAGGCGCTGCTGGAGGCCATGCTGCTGGTGGTGCTGGTGATGTACGTGTTCCTGCAGAACATGCGCGCCACGCTGATCCCGGCCATCGCGGTGCCGGTGGTGCTGCTGGGCACCTTCGGCGTGCTGTCGCTGGCGGGTTATTCGATCAACACGCTCACCATGTTCGGCATGGTGCTGGCCATCGGTCTCCTGGTGGACGATGCGATCGTGGTGGTGGAGAACGTCGAGCGCGTGATGCACGAGGAAGGCCTCTCGCCCAAGGAAGCCACGCGCAAGTCGATGGCCGAGATCACGCCGGCGCTGGTGGGCATCGCGCTGGTGCTGTCGGCGGTGTTCATTCCGATGGCCTTCTTCGGCGGCTCCACGGGCGTCATCTACCGGCAGTTCTCGATCACCATCGTCTCGGCGATGGCGCTGTCGGTGTTCGTGGCGCTCACCCTTACGCCGGCGCTGTGCGCCACCCTGCTCAAGCCGGTGCACAAGGGCGAGCATCCGGTGCCGCGCCGCGGGCTGCTCGGGCGCGTCGACCGCTTCTTCGCGGCCTTCAACCGCGGCTTCGACAAGAGCGCGAACCGCTACGAAGGCATCGTCGGCGGCATCGTGCGGCGCGGCAAGCGCAGCCTGGTGGTGTACCTGCTGATCGCGGGCGTGATGGCGCTGCTGTTCATGCGCCTGCCCACCTCCTTCCTGCCCGACGAGGACCAGGCCTTCCTGCAGGTGCAGGTGACCCTGCCGCCGGGCGCCTCGAACGCGCGGCTGCAGCCGGTGGTCGAGCAGGTGCAGCAGTATTTCGGCAAGCAGGCCGAGGTGCTGAGCGTGAACGTCATCACCGGCCAGAACGGCGACCAGAGTTCGGCGCGCGCCTTCGTCAAGCTCAAGGACTGGTCGGAGCGCACCGGCGCGGGCCAGTCGGCGGCCGAGCTGGCGCGGCGCGCCAACAAGGAGCTGTCGACGGTGCGCGACGCGCGCATCTTCGTGCTGCTGCCGCCGGCGGTGCGCGGGCTGGGCGCCAACGCGGGCTTCAACTTCCACCTGAAGGACATCAACGGCCTGGGCCACGATGCGCTGGTGAAGGCGCGCGACCAGGCCATCGAGCTGCTGGGCCAGCGGCCCGAGGTGGCCAACGTGCGCAGCAACAACCTCGACGACACGCCGGAGTTCGCGGTGGACATCGACGACGCGCGCGCCGGCGCGCTGAGCCTGGCCACGTCGGACATCGACAGCACGCTTTCGAGCGCCATGGGCGGCACCTACATCAACGACTTCCTCGACAAGGGCCGCGTCAAGCGCGTGTACATGCAGGGCGACACCGACTTCCGCATGCTGCCCGCCGACATCGACCGCTGGAGCGTGCGCAACAGCCTGGGCCAGATGGTGCCGTTCCCGTCGTTCTCCAGTTCGCGCTGGAGCTACGGCTCGCCGCAGCTGCAGCGCTACAACGGCAGCCCGAGCTACGAGTTCGTGGGCGACGCGGCGCCCGGCGTGAGTTCGGGCGACGCCATGGCCGCGGTGGACGCGGTGATGAAGCAGATGCCCCCCGGCATCGGCTACGAGTGGACCGGCGCGTCGCTGCAGGAGCGGCTGTCGGGCGCGCAGGCGCCGCTGCTCTACGCCATATCGATCCTGTTCGTGTTCCTGTGCCTGGCCGCGCTGTACGAAAGCTGGTCGGTGCCGTTCTCGGTGATCCTGGTGGTGCCGCTGGGCATCGTGGGGGCGCTGCTTTTCACCAGCCTGCGCGGGCTGAGCAACGACGTGTACTTCCAGGTCGGCCTGCTGACCACGGTGGGGCTGTCGTCGAAGAATGCGATCCTGATCGTGGAGTTCGCCAAGCAGCTGCAGGAGCAGGGCAAGGGCGTGGTCGAGGCGACGCTGCAGGCGGTGCGCCTGCGGCTGCGGCCCATCCTCATGACCTCGCTGGCCTTCGGCTTCGGCGTGCTGCCGCTGGCCATCGGCACCGGCGCGGGCGCTGGTGGCCGCCAGTCGATCGGCACGGCCGTGCTCGGCGGCATGGTGGTGGGCACCGCGCTGGGCATCTTCTTCGTGCCGCTGTTCTTCGCATTGATTCGCGGCTGGCTGGCCGGAAGGCGCAAGGCTAAGCCGGTGCAGGAGATCTCCTCCGGCACGACCGCCGGACAGGGAGGCCACTGA
PROTEIN sequence
Length: 1057
MAQFFIDRPIFAWVLSIVVMLAGLMAIRTLPLEQYPDIAPPRVSINATYTGASAKTVEDSVTQVIEQQMKGLDNLLYMQSTSNSSGVARLSLTFDAGTNIDVAQMQVQNKLQQAMSRLPQQVQSRGVTVTKGGNDFLMIVSMYSGDGSASAVDVGDYISSNLVDVISRIDGVGEVQTLGTGYAMRLWLDPDKLRKYALIPSDVSAAITAQNAQVSAGQLGALPAAAGQQLNATITARSKLQTAEQFENVVLRSTPDGAVVRLKDVARVELGAENLTVRSQLGGRPGAGLGVVLADGANAVQVAEAVKARIEELKPLFPNQLQTFVSYDTTPFVSASIDEVVKALLEAMLLVVLVMYVFLQNMRATLIPAIAVPVVLLGTFGVLSLAGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVMHEEGLSPKEATRKSMAEITPALVGIALVLSAVFIPMAFFGGSTGVIYRQFSITIVSAMALSVFVALTLTPALCATLLKPVHKGEHPVPRRGLLGRVDRFFAAFNRGFDKSANRYEGIVGGIVRRGKRSLVVYLLIAGVMALLFMRLPTSFLPDEDQAFLQVQVTLPPGASNARLQPVVEQVQQYFGKQAEVLSVNVITGQNGDQSSARAFVKLKDWSERTGAGQSAAELARRANKELSTVRDARIFVLLPPAVRGLGANAGFNFHLKDINGLGHDALVKARDQAIELLGQRPEVANVRSNNLDDTPEFAVDIDDARAGALSLATSDIDSTLSSAMGGTYINDFLDKGRVKRVYMQGDTDFRMLPADIDRWSVRNSLGQMVPFPSFSSSRWSYGSPQLQRYNGSPSYEFVGDAAPGVSSGDAMAAVDAVMKQMPPGIGYEWTGASLQERLSGAQAPLLYAISILFVFLCLAALYESWSVPFSVILVVPLGIVGALLFTSLRGLSNDVYFQVGLLTTVGLSSKNAILIVEFAKQLQEQGKGVVEATLQAVRLRLRPILMTSLAFGFGVLPLAIGTGAGAGGRQSIGTAVLGGMVVGTALGIFFVPLFFALIRGWLAGRRKAKPVQEISSGTTAGQGGH*