name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_300_bf_scaffold_250_curated_31
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
43293..44159
|
LysR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI0003630B90
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADU35729.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_32
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(44207..47413)
|
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
ribonuclease, rne/rng family; K08300 ribonuclease E [EC:3.1.26.12]
Ribonuclease E n=1 Tax=Variovorax sp. CF313 RepID=J2KYT2_9BURK
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_33
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
47956..49068
|
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
ribosomal pseudouridine synthase C , large subunit (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Variovorax sp. CF313 RepID=J3CTG2_9BURK
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_34
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
49061..49732
|
HAD superfamily hydrolase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18]
HAD family hydrolase n=1 Tax=Variovorax paradoxus RepID=UPI00037B0BCA
Haloacid dehalogenase superfamily enzyme, subfamily IA {ECO:0000313|EMBL:EJL78155.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_35
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
49754..50122
|
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase n=1 Tax=Variovorax sp. CF313 RepID=J3CTZ1_9BURK
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase {ECO:0000313|EMBL:EJL78156.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
rieske (2fe-2S) iron-sulfur domain
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_36
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
50124..51140
|
ClpP class periplasmic serine protease n=1 Tax=Variovorax sp. CF313 RepID=J2TI14_9BURK
ClpP class periplasmic serine protease {ECO:0000313|EMBL:EJL78157.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative peptidase, S49 family
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_37
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(51145..52296)
|
Fucose permease n=1 Tax=Variovorax sp. CF313 RepID=J2KYT6_9BURK
Fucose permease {ECO:0000313|EMBL:EJL78158.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative transporter, MFS-type
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_38
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(52299..53060)
|
uroporphyrin-III methyltransferase n=1 Tax=Variovorax paradoxus RepID=UPI0003672A60
Putative methyltransferase {ECO:0000313|EMBL:EJL78159.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative methyltransferase
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_39
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(53057..53638)
|
septum formation protein Maf n=1 Tax=Variovorax paradoxus RepID=UPI00037E4996
Maf-like protein PMI12_01421 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
maf protein; K06287 septum formation protein
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_40
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
53721..54290
|
Putative metal-binding protein, possibly nucleic-acid binding protein n=1 Tax=Variovorax sp. CF313 RepID=J3CTZ3_9BURK
Putative metal-binding protein, possibly nucleic-acid binding protein {ECO:0000313|EMBL:EJL78161.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_41
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
54437..54619
|
50S ribosomal protein L32 n=4 Tax=Variovorax RepID=RL32_VARPS
rpmF; 50S ribosomal protein L32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_42
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
54747..55778
|
fatty acid/phospholipid synthesis protein plsx; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15]
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" sou
Phosphate acyltransferase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2L9_VARPE
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_43
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
55778..56758
|
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
3-oxoacyl-(acyl carrier protein) synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Variovorax sp. CF313 RepID=J3CTG7_9BURK
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_44
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
56863..57765
|
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
malonyl CoA-acyl carrier protein transacylase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Variovorax sp. CF313 RepID=J2KD72_9BURK
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_45
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
57792..58535
|
fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG (EC:1.1.1.100)
3-ketoacyl-ACP reductase n=1 Tax=Variovorax paradoxus RepID=UPI00037B029B
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EJL78166.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_46
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
58635..58874
|
Acyl carrier protein n=4 Tax=Variovorax RepID=ACP_VARPS
putative acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_47
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
58974..60218
|
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
3-oxoacyL-(acyL-carrier-protein) synthase 2; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Variovorax sp. CF313 RepID=J2KYU5_9BURK
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_48
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
60232..60714
|
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2M5_VARPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU35746.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_49
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
60725..61402
|
RNA polymerase sigma factor n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2M6_VARPE
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_50
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
61420..62097
|
Negative regulator of sigma E activity n=1 Tax=Variovorax sp. CF313 RepID=J3CTZ8_9BURK
Negative regulator of sigma E activity {ECO:0000313|EMBL:EJL78171.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
anti sigma-e protein rsea family protein; K03597 sigma-E factor negative regulatory protein RseA
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_51
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
62272..63213
|
sigma E regulatory protein MucB/RseB n=1 Tax=Variovorax paradoxus RepID=UPI00037B0804
Negative regulator of sigma E activity {ECO:0000313|EMBL:EJL78172.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
sigma e regulatory protein, mucb/rseb; K03598 sigma-E factor negative regulatory protein RseB
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_52
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
63323..64804
|
Protease Do {ECO:0000313|EMBL:ADU35750.1}; EC=3.4.21.108 {ECO:0000313|EMBL:ADU35750.1};; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
Protease Do n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3H0_VARPE
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_53
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
65327..67138
|
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
lepA; elongation factor 4 LepA (EC:3.6.5.n1)
Elongation factor 4 n=1 Tax=Variovorax sp. CF313 RepID=J3CTH2_9BURK
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_54
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
67146..68111
|
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
signal peptidase n=1 Tax=Variovorax paradoxus RepID=UPI00037EEF3B
putative signal peptidase I LepB
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_55
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
68146..68514
|
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI00036C88FC
putative transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:AGU48606.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_56
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
68532..69218
|
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease 3; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
Ribonuclease 3 n=1 Tax=Variovorax sp. CF313 RepID=J2TI32_9BURK
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_57
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
69226..70191
|
GTPase Era n=1 Tax=Variovorax sp. CF313 RepID=J2KYV5_9BURK
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
GTP-binding protein Era; K03595 GTP-binding protein Era
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_58
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
70328..71098
|
DNA repair protein RecO n=1 Tax=Variovorax sp. CF313 RepID=J3CTH5_9BURK
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O)
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_59
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
71095..71856
|
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
pyridoxal phosphate biosynthetic protein pdxj (EC:2.6.99.2); K03474 pyridoxine 5-phosphate synthase [EC:2.6.99.2]
Pyridoxine 5'-phosphate synthase n=1 Tax=Variovorax sp. CF313 RepID=J2KD86_9BURK
|
|
SCNpilot_cont_300_bf_scaffold_250_curated_60
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
71870..72262
|
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237180};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
holo-acyL-carrier-protein synthase; K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
4''''-phosphopantetheinyl transferase n=1 Tax=Variovorax paradoxus RepID=UPI000382DD31
|