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SCNpilot_cont_300_bf_scaffold_250_curated_50

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 61420..62097

Top 3 Functional Annotations

Value Algorithm Source
Negative regulator of sigma E activity n=1 Tax=Variovorax sp. CF313 RepID=J3CTZ8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 225.0
  • Bit_score: 384
  • Evalue 7.10e-104
Negative regulator of sigma E activity {ECO:0000313|EMBL:EJL78171.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 225.0
  • Bit_score: 384
  • Evalue 9.90e-104
anti sigma-e protein rsea family protein; K03597 sigma-E factor negative regulatory protein RseA similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 225.0
  • Bit_score: 358
  • Evalue 1.70e-96

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
ATGAATCAGACGATGACGGTTCGGGAACAGGTGTCCGCACTTGCGGATGGTCATTTGCAGGGCGAGTCGTTCGCGCAGGCGATCGATGCAATCTGCGCCGACAGCGAGTCGCGCGCGGCCTGGCAGGCCTACCACGTGGTGGGGGATGTGCTGCGTTCGGGCTCTCATTCGCCGTGCAGCGACAGTTCGGCCTTCCTGGCGCGCTTCCAGCAACGGCTGGCCGCCGAGCCGGTGGTGCTCGCCCCCGTCGCGGCGCCGGTAGCCGCGCCTGTGGCGATTCCCGTGCAGCGCAGGGCCGAAGCGGCCAACGAGCCGGTATTCCGCTGGAAGCTGGTGGCCGGCGCGGCCTCGCTGATGGCGGTGGCCGCCATCGGCTGGACGCTGGTCGGCAACGGTGCGGCGATTCCGCAACCCGGCGCGCAAATCGCGTCGGTCCAGCAACAACAACAGCCGGCCGTCAACTCGGTGCTGGCCGCGGCGGCCCTGAGCGGTCCGCAGCAGCCCGCCGGCGCCACGCTGACGCCCACGCGCGTGATCGTCGGCAACGGCAGTCCGCAAGTCATGCTGCGCGACCCGCGGCTCGATCAACTGCTCGAAGCGCACCAGCAAGCCGGCGGCGCTTCGCAAATGCCTTCGGGCTTCCTGCGCAATGCCACTTTCGAAGGGCCCACGCGCTGA
PROTEIN sequence
Length: 226
MNQTMTVREQVSALADGHLQGESFAQAIDAICADSESRAAWQAYHVVGDVLRSGSHSPCSDSSAFLARFQQRLAAEPVVLAPVAAPVAAPVAIPVQRRAEAANEPVFRWKLVAGAASLMAVAAIGWTLVGNGAAIPQPGAQIASVQQQQQPAVNSVLAAAALSGPQQPAGATLTPTRVIVGNGSPQVMLRDPRLDQLLEAHQQAGGASQMPSGFLRNATFEGPTR*