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SCNpilot_cont_300_bf_scaffold_250_curated_51

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 62272..63213

Top 3 Functional Annotations

Value Algorithm Source
sigma E regulatory protein MucB/RseB n=1 Tax=Variovorax paradoxus RepID=UPI00037B0804 similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 313.0
  • Bit_score: 588
  • Evalue 4.50e-165
Negative regulator of sigma E activity {ECO:0000313|EMBL:EJL78172.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 313.0
  • Bit_score: 582
  • Evalue 2.60e-163
sigma e regulatory protein, mucb/rseb; K03598 sigma-E factor negative regulatory protein RseB similarity KEGG
DB: KEGG
  • Identity: 91.4
  • Coverage: 313.0
  • Bit_score: 575
  • Evalue 1.20e-161

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 942
ATGAGCGTCACCGAGTGGCTGCAGCGCATGCATGCGGGCGCCAGGCAGCGCAATTACGTGGGCACTTTCGTGGTGTCGGCGCCTGGCGGTGACCTGTCGAGCGCGCGCATCTGGCACGTGCGCGACGGCGATCACCAGATCGAGCGCATCGAGGCGCTGTCGGGGCCGCCGCGCTCGACCTTCCGGCGCAACCGCAACGTCATGACCTTCCTGCCGGAGGCGAAGGTCGTCAAGGTCGAGAAGCGCGAGAACCTCGATCTCTTCCCGAACCTGCCGGACAAGCCCGATTCGTCGATCGGCGATTTCTACGACGTGCGCGCGATCGGCAAGGACCGCGTGGCGGGCTTCGATGCCGACGTGGTGCAACTGGTGCCGCACGATGGGCTGCGCTTCGGCTACCGTGTCTGGAGCGAGCGCCGTTCGGGCCTCGTGGTGAAGCTGCAGACCGTCGACAGCGAATCGCGCGTGGTGGAGCAGTCGGCGTTCTCCGAACTGCAGCTCGACGCGCCCGTGAAGGCACAGGCGCTGGCGCAAATGATGGCCAACACCTCCGGCTATCGCATCGAGAAGCTCGAACTCGAGCGCTCCAGCGCGCAGGACGAGGGCTGGACCCTCAGCACGCCGGTGGCCGGCTTCAAGCCCCGCAGCTTCTTCCGTCGTCCGCCGAGCGGCGACAGCAACAACAACGGCGGCAAGCAGAAACAACAGGACGCGACCACGGTCCAGTGGACCTTCTCCGACGGGTTGGCTTCGGTGTCGCTCTTCATCGAGCGCTACGATGCCGCGCGCGCGCCCCGCGACGGCGTGCTGACCATCGGCGCGACCAACGCGATCCGCCGGCGCCTGCCCGAGCCCGCCAGCGACTGGTGGCTGACCGCGGTCGGCGAAGTGCCGCAACAGACACTCAACGCATTCGCCCAGAGCCTTGCCCGCACGCGCTGA
PROTEIN sequence
Length: 314
MSVTEWLQRMHAGARQRNYVGTFVVSAPGGDLSSARIWHVRDGDHQIERIEALSGPPRSTFRRNRNVMTFLPEAKVVKVEKRENLDLFPNLPDKPDSSIGDFYDVRAIGKDRVAGFDADVVQLVPHDGLRFGYRVWSERRSGLVVKLQTVDSESRVVEQSAFSELQLDAPVKAQALAQMMANTSGYRIEKLELERSSAQDEGWTLSTPVAGFKPRSFFRRPPSGDSNNNGGKQKQQDATTVQWTFSDGLASVSLFIERYDAARAPRDGVLTIGATNAIRRRLPEPASDWWLTAVGEVPQQTLNAFAQSLARTR*