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SCNpilot_cont_300_bf_scaffold_250_curated_56

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 68532..69218

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease 3; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 228.0
  • Bit_score: 427
  • Evalue 1.00e-116
ribonuclease iii (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3] similarity KEGG
DB: KEGG
  • Identity: 93.9
  • Coverage: 228.0
  • Bit_score: 411
  • Evalue 2.20e-112
Ribonuclease 3 n=1 Tax=Variovorax sp. CF313 RepID=J2TI32_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 228.0
  • Bit_score: 427
  • Evalue 7.40e-117

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 687
GTGGACGGCAGCCTCGTCGCGCTGCAGGCGCGTCTCCAGCACACCTTCTCCGATCAGCGGCTGCTCCAGCTCGCGCTCACGCACCGCAGTTTCTCGGCCGACCACAACGAGCGCCTCGAGTTTCTCGGCGACTCGGTGCTGAATCTCGCGGTTTCCCACCTTCTCTATATCCGTCTTTCGGCGCTGCCCGAGGGCGACCTGTCGCGCGTGCGCGCCAACCTCGTCAAGCAGGACACCCTGCACCGCCTGGCGGTGGGGCTGGCGCTGTCGCCGCTGCTCAAGCTCGGCGAAGGCGAGGCCCGTTCCGGCGGCCCCAACCGTCCGTCGATCCTGGCCGATGCGCTCGAGGCGCTGATCGGCGCGGTCTACCTCGATGCCGGTTTCGCGGCTGCCCAGGCGCTGGTGCACCGGCTCTACGAGGCGGTCGAGATCAACCCGCGCATGGAAGCGGCGGCGAAAGATCCCAAGACCGAATTGCAGGAATGGCTGCAGGGTCACAAAATGAAGCTGCCGGTGTACCGCGTGGCCGCCACACTGGGCGCGGCGCACAAGCAGACTTTCGATGTCGAGTGCGAAGTGCCCGAGTTGGGTCTTCGCGAACGCGGCATCGGCGGCTCGCGCCGCGCCGGCGAGCAGGCTGCCGCGGCCGCCATGTTGATCCGGCTCAAGGCACGCGGCGCCGCGTGA
PROTEIN sequence
Length: 229
VDGSLVALQARLQHTFSDQRLLQLALTHRSFSADHNERLEFLGDSVLNLAVSHLLYIRLSALPEGDLSRVRANLVKQDTLHRLAVGLALSPLLKLGEGEARSGGPNRPSILADALEALIGAVYLDAGFAAAQALVHRLYEAVEINPRMEAAAKDPKTELQEWLQGHKMKLPVYRVAATLGAAHKQTFDVECEVPELGLRERGIGGSRRAGEQAAAAAMLIRLKARGAA*