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SCNpilot_cont_300_bf_scaffold_250_curated_33

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 47956..49068

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 370.0
  • Bit_score: 682
  • Evalue 2.90e-193
ribosomal pseudouridine synthase C , large subunit (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 91.5
  • Coverage: 366.0
  • Bit_score: 664
  • Evalue 1.80e-188
Pseudouridine synthase n=1 Tax=Variovorax sp. CF313 RepID=J3CTG2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 370.0
  • Bit_score: 682
  • Evalue 2.10e-193

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1113
ATGACCGCGCTGGTGAAAAACATTATAGGTGCGAAGCAGAGCCCCGCGGCTGCTCCAAATCCCGCAGACCAAAATGCCTCAGGTGAGCCCGGGGCACCGAATGCGGCCATCAAATTCCTCACGGTCGATGCCGAATCCGCCGGGCAGCGGCTCGACAATTTTCTGTTCCGCCATCTGAAAGGCGTGCCCAAGACGCATGTCTACCGGATCATCCGTTCGGGCGAGGTGCGCATCAACAAGGGCCGCGTGCAGGCCGAAACCCGCATCGAGGCGGGCGACGTGCTGCGGCTGCCGCCGATCCGGATTTCCGCGCGCGCGGAAGATGGCGCCACCCCGCCCGCGCCAGCGCGCGAGTTCCCGGTGCTGCTGGAGGACGACGCCGTCCTGGCCATCGACAAGCCGGCCGGCGTGGCCGTGCACGGCGGCAGCGGCGTGAGCTTCGGTGTGATCGAGCAATTGCGCACGGCGCGGCCGGGCGCCAAGTTCCTGGAACTGGTGCACCGGCTCGACCGCGAAACCTCCGGCATCCTGCTGGTCGCCAAGAAGCGCAGCGCGCTGGTCGCCTTGCAAGACCAGTTCCGCGAACGCGAGACCGGCAAGACCTATCTGGCGCTGGTCGAGGGCGCGTGGCCCGCCAACAAGAAGGTGCTCGACGCGCCGCTGGCCAAGTACCTGCTGCCCGACGGTTCGGGCGCCGGTGCGGGCGAGCGCCGCGTGCGCGTGGTCGCCAAGGACCATCCGGACGCGATGCGCGCCGTGACGCTGGTGCGCGTGCTGGCGCGGCTCACGCTGCCGGGCGATGCCACGCCGATGTCATTGCTGGCCGTGACCATCAAGACCGGGCGCACTCACCAGATCCGCGTGCACCTCGCGTCGGCGGGCCATCCGATCGCCGGCGACGACAAGTACGGCGAATCCGATCGCCAGCGCGCCCTGCAGAAAATCGGCCTCAAGCGCATGTTCCTGCATGCCTGGCGCCTGCAATTCAACCATCCGGCCAGCGGAGAACGCGTGGCGCTGCAGGCCGGCCTGCCGCCCGAACTGAATACGCTGATGCCGCCCACCGCCCTCGAGGCAATGGCCCAACACCCCACTCCCACGGCCCATGACTGA
PROTEIN sequence
Length: 371
MTALVKNIIGAKQSPAAAPNPADQNASGEPGAPNAAIKFLTVDAESAGQRLDNFLFRHLKGVPKTHVYRIIRSGEVRINKGRVQAETRIEAGDVLRLPPIRISARAEDGATPPAPAREFPVLLEDDAVLAIDKPAGVAVHGGSGVSFGVIEQLRTARPGAKFLELVHRLDRETSGILLVAKKRSALVALQDQFRERETGKTYLALVEGAWPANKKVLDAPLAKYLLPDGSGAGAGERRVRVVAKDHPDAMRAVTLVRVLARLTLPGDATPMSLLAVTIKTGRTHQIRVHLASAGHPIAGDDKYGESDRQRALQKIGLKRMFLHAWRLQFNHPASGERVALQAGLPPELNTLMPPTALEAMAQHPTPTAHD*