ggKbase home page

SCNpilot_cont_300_bf_scaffold_250_curated_72

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(82799..85627)

Top 3 Functional Annotations

Value Algorithm Source
FimV N-terminal domain containing protein n=1 Tax=Variovorax sp. CF313 RepID=J2KDA1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 958.0
  • Bit_score: 1442
  • Evalue 0.0
FimV N-terminal domain containing protein {ECO:0000313|EMBL:EJL78195.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 958.0
  • Bit_score: 1442
  • Evalue 0.0
fimv n-terminal domain; K08086 pilus assembly protein FimV similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 961.0
  • Bit_score: 1332
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2829
ATGACAAGACATCTGTTGCCTGCGGCCAGTCCATCGGCCGCTCGCCCGCCTCTGCCATCGAACGGTTGGCGCCTTTCCATCCTGGGCGCGGCGGCGGCCGTGGCACTTGGCCTCGCCAGCACCGACGCCAGCGCCTTCGCGCTGGGCCAGTTGAAGGTTCAGTCTGCGCTTGGCGAGCCGTTGCGCGCCGAGATCGACGTGACCGAGATCGCCGCCAACGAGGCGGACGGCCTGAAGATCAACATCGCCACGGCCGAGGCCTTCAAGAACGCGGGCGTGCCGTACAACCCGGCGCTGCGCGACGTACGGGCGACCTTGCAGCGCCGCGCGGGCGGCCAGTACGTGGTGCGCCTGAGCGGCAACCGCCCGCTCAACGACCCGTTCATCGACCTGCTGCTGGAAGCCAACGGCTCGTCGGGCCGGATCGTGCGCGACTACACCGTGCTGCTCGATCCGCCGGCCACGCGCCAGGCCGCTGCAGCGATCCCGCCGGCAGCCCCGATTGCCCCGCAGATCACGACGCCCGTCGAGCGGCCGGCCGCCAGCGCACGCCGCGAGCGTGCACCCGTGGCCGCAGCGCCTTCGGCTCCAGTCGCCGCGGCGCCCGCACCGGCAGCTGCTGCCCCGGCCCCTGCCGTCGCCAGCGCACCCGTCCGTACCGGCGGCGGCAGCGGTAGCGGCGAACAGGTCACGGTGCAGCGCGGTGACACCGCCAGCAAGATCGCCGGCGCCCACAAGCCGGCCGACGTTTCGCTCGACCAGATGCTGGTGGCCCTGCTGGCCGCCAACCCCAATGCCTTCATCGGAGGCAACGTCAACCGCATGCGCGCAGGCGCCGTGCTCGACCTGCCGACCGCCGCCGAAGCGGCAGCCACGCCAGCGGCCGAGGCGCGCCGCACGGTCACGGCCCAGAGCCGCGACTTCGGCTCCTACCGCCAACGCCTGGCCGAGAACGCGCCGACCTCGAACGTCGCCAGCGCCAGCCGTAATGCCTCGGGCAAGCTGCAGGCCAACGTCGAAGACCGCAACGCGGCGGCCAGCGCCCCCGACAAGCTCACCATCTCGCAAGGCAGCGCCTCCACCCGCGCCGCCGACGAAAAGGTTGCACAGGCCCGTCAGGCGCAGGACAGCAGCAACCGCGTCGCCGAGCTGTCGAAGAACATCGAGGACCTGAACAAGCTCAAGGCAGGTACTGGCGCAGGCGCGCCGGCCGCCGCGCCCGCCACGCCGGGCATCCCTGTTCCGGCACCATCCACCGCTGCCACGACGGCACCTGCGGCAGCGAGCCCCGCACCGGCACCCGCTGCGGCGCCAGCGCCAGCTCCAGCCGCTCCGGCGGCCGCCGCACCAGCCGCTGCTGCAACGCCCGCCGCTGCACCTGCAGCTGCAGCCCCCGCCGCCCCCACGCCAGAAGCAACCGCAGCCGCACCTGTTGCAGCCGCCGCACCCGCGGCAGCGGCGACGACGCCCGCGGCCGATGCCGCAGCCACGCCTCCTGCCGCCCCCGCGGCCGACGCTGCGGCCCCCGCAGCGCCGAAGCCGGCCCCGAAGAAAGTGGTGGCACCGCCCCCGCCCCCACCGGAGCCCACCTTCCTCGAAGAACTGCTGGACAACCCGCTGATGCTGGCCGGTGCCGCGCTGATCGCGCTGCTGGTCGGTTTCCTGCTGTACCGCGTGCTGGGTCGCCGCCGCGAGGAAATGAGCGAAAGCGTCTTCCTCGAGAGCCGCATTCCCAAGGACTCGTTCTTCGGCGCCAGCGGCGGCGAATCGGTCGACACCAAGAACCGCGGCGATTCCACCGTGTCGTCGCTGTCGTACTCGCCGAGCCAGCTCGACGCGGGCGATGTCGACCCCGTGGCCGAAGCCGACGTCTACCTGGCCTACGGCCGCGACCTGCAGGCCGAGGAAATCCTGCGCGAAGCGCTGCGCCTGAACCCCGACCGCACCGCGATCCACCTCAAGCTGCTCGAAATCCACGCCAAGCGCCGCGACGTGCGAGCCTATGAAAGCCTCGCCACCGAAGTGCACAAGCTGACCGGCGGCCTGGGCTCCGAGTGGACGCGCGTGGTCGACATGGGCAAGGACCTCGATCCGGGCAACCCGCTGTACGAATCCGGCACCAGCCGCAGCGGTGGCGGTGCCAGCGCCGCTGAAACAGCCGCCTTCGCGGGCGCCCTGGCCGCGGCCGCCAAGCCGGTGGCAGCGCCTCCTGCTTCGCCACCCGTGGCTGTCGCTCCGCCCGCCTTCGTTCCGTCGGTGGCACCGCTGGACTTCGACCTCGACCTGACCACGCCGCCGGCCCCTGCGCCCGCTCCGGCACCGGCTCCGAGCCATGCACCGGTCGGCGCCAGCCTGCCGAAGTCGGCCTACGCCCCCGCGCCGACGACCGCTCGCCCCGCCGCACCGCTGTCGAACGGCCACGCCGCGACGCCTGTCGATCTCGAAAACGACTTCGACACCGCGCCCGGCGCCCTGACCGCACTGACGCCCGACACCCGCCCCTCTTCGCTGAGCGACGCCGAACACAACACCCGCCCCGCCATGCTGCGCAACACGCTGCCGGCCGATTCGGGCTTCATCGAGTTCGACATGAGCGCGCTGGCCGGCCTGCCCGCTCGCGCCGCCGAAGCGCCCGTGGCACGCCCCTCGGTCGCCACGCACGACGACGAAGGCGATGACAGCCCCCACGCTGTCAAGCTCTCGCTTGCCCGCGAGCTGCAAGCCATCGGCGACGTCGAAGGCGCCCGCTCGCTGGTCGAGGAAGTCGAAGCCGAAAGCGCTGGCGACCTCAAGTCGCAAGCCCGTCAACTGCTCGCGGAACTGCGCTGA
PROTEIN sequence
Length: 943
MTRHLLPAASPSAARPPLPSNGWRLSILGAAAAVALGLASTDASAFALGQLKVQSALGEPLRAEIDVTEIAANEADGLKINIATAEAFKNAGVPYNPALRDVRATLQRRAGGQYVVRLSGNRPLNDPFIDLLLEANGSSGRIVRDYTVLLDPPATRQAAAAIPPAAPIAPQITTPVERPAASARRERAPVAAAPSAPVAAAPAPAAAAPAPAVASAPVRTGGGSGSGEQVTVQRGDTASKIAGAHKPADVSLDQMLVALLAANPNAFIGGNVNRMRAGAVLDLPTAAEAAATPAAEARRTVTAQSRDFGSYRQRLAENAPTSNVASASRNASGKLQANVEDRNAAASAPDKLTISQGSASTRAADEKVAQARQAQDSSNRVAELSKNIEDLNKLKAGTGAGAPAAAPATPGIPVPAPSTAATTAPAAASPAPAPAAAPAPAPAAPAAAAPAAAATPAAAPAAAAPAAPTPEATAAAPVAAAAPAAAATTPAADAAATPPAAPAADAAAPAAPKPAPKKVVAPPPPPPEPTFLEELLDNPLMLAGAALIALLVGFLLYRVLGRRREEMSESVFLESRIPKDSFFGASGGESVDTKNRGDSTVSSLSYSPSQLDAGDVDPVAEADVYLAYGRDLQAEEILREALRLNPDRTAIHLKLLEIHAKRRDVRAYESLATEVHKLTGGLGSEWTRVVDMGKDLDPGNPLYESGTSRSGGGASAAETAAFAGALAAAAKPVAAPPASPPVAVAPPAFVPSVAPLDFDLDLTTPPAPAPAPAPAPSHAPVGASLPKSAYAPAPTTARPAAPLSNGHAATPVDLENDFDTAPGALTALTPDTRPSSLSDAEHNTRPAMLRNTLPADSGFIEFDMSALAGLPARAAEAPVARPSVATHDDEGDDSPHAVKLSLARELQAIGDVEGARSLVEEVEAESAGDLKSQARQLLAELR*