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SCNpilot_cont_300_bf_scaffold_250_curated_78

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 91488..94958

Top 3 Functional Annotations

Value Algorithm Source
transporter n=1 Tax=Variovorax paradoxus RepID=UPI00035F6524 similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 999.99
  • Bit_score: 1734
  • Evalue 0.0
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 31.2
  • Coverage: 999.99
  • Bit_score: 433
  • Evalue 2.10e-118
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:ADG20551.1}; TaxID=640511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1002).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.9
  • Coverage: 999.99
  • Bit_score: 433
  • Evalue 9.50e-118

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Taxonomy

Burkholderia sp. CCGE1002 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3471
ATGAACATTTCTTTTCGCAGCCTCTGGAATGACGCATTGGGGGCTTGGATTGCCGTTTCTGAAATTTCCAGGAGCCATTCCGGTTCGCGCAGTACGTCGAGGCTCGATAGCGCCGCCAAGCCGGGTGAGCCGGCACGCCGGCTGTTCCGGCTCAGTGCCCTGATGAGCGTGGTGGCCGTGCTCGGCGCGGCACCGTTCGTTTCCGCATCGGCGCAAAGCGTGGTGATCGGCACCACGGGCAGCGGCGGCCTCGGCGTGGGCATCGGTGGCGACGGCGGAGCCGGCGGCATCGGCGGCGGTGGTGGCGGCGGCAGCGGCGGCGCGCCCGCGGGCGGCGGCGGCGGCGGCTACGGAGCGGGCGGCGGTGGCGCCGGCTTCACGTACGGTTCCAACAGCGGTGGCGCCGGCGGCCCGGGCAAGGGCGGCGATGGCGGCTCCGACACATGGGGCCAGGGCGGCGCGGGCAGCAACGGTGGCGCATCGGGCACCAACGGCGTCCAGGGGGCGGACGGCCCGTTCGGTCCGAAGAACGGCGGCAACGCCCTGGCCGCCATTGCGGAGGGCTCCACGTTCGGCGGCCTCACCAGCGCGACTTTCTCGGCAGACAGGACGGTGAACGGCTCGCTGGGCATCGGCGGCGGCGGCGGCGGTGGTGCCGGCGCCAGCGGCACGGCCGCGGGTGGTGACGGATCGAGCGGCGGCGCGGGCGAACTCACGATTTCGGCCGGAACCACGACCGTGACCGGCGCCATCGTCATCGGCGGCTCGGGCGGCGGCGGCGGTGGCGGCAGCGGCAACGCGAACGGCGGCAGGGGCGGCGATGGCGGCAACGGGCAGCTGACCGTCAGCGACGGCAAGTTGGTCGCCGACAGCATCGTCATCGGCGGCAGCAGCGGCGGCAAGGGCTCTGGAGGCGCGACCAGCGGCCTGGCCGGAGCGGGCGCCACCGGAACGCTGACGGTCACCGGCGGCAGCATGAACGTGGCGCACGGTGTCACCGTGAACGGCAACGGGCAGGTCGACTTCAAGCCGGACGCCGGAACCCAGGTCACGGCCGGCTACGCCATCTCGGGCGCCGGCAGCGTCTCGCAGACGGGCGCCGGCACCACGGTGATGACCGGCGACAACACCTACACCGGCGGCACCACGATCAGCGCCGGCACCCTGCAGATCGGCGCGGGCGGCACGACCGGCAGCATCGTCGGCAAGGTCAGCAACGCCGGCACGCTGGTGTTCGACCGCTCGAACACACTCACCTTCAACGGCACCATCAGCGGCACCGGCCAGGTGCAGCAGATCGGCAGCGGCACGCTCGAGCTGACGGGCGCCAACAGCTACGAGGGCGGCACGCTGATCGGCGGCGGCACGCTGAAGGTGGCCGGCGACGGGGCGCTGGGCGCGGCCACGGGCGCGCTCACCTTCAACGGCGGCGGCACGCTGCAGAGCACGGGCGCCTTCACCAGCGCGCGCGACGTGACGCTGGCCGGCGCCGGCAGCATCGTGAGCAAGGGTGCGCTGTCGATGAGCGGCGTCTTCACCGGCAACGGTGCGCTCGACGTGCAGGCGGGTTCGGGCGACATCACCCTGACCAATGCCGGCAACGACTTCGGCGGCGCCGTGAGCCTGAGCGGCGCCACGGTGCAGATCAACGACAAGAACGCGCTGACGCTGGGCACGCTGAATACCGGCGCGCTCACCGCCACGAGCCACGGCAACCTGCAGTTCCAGGGCGGCGGCTCGGCATCGTCCATCGATGTCCGCAGCAACGACGGCGCGGTGACGCAGACCGGCGCGTTGTCTGTGATGGGAAAACTGTCGGTCGATGCAGGCACGGGCAGCATCGCGCTGAACAACACGAGCAACAGCTTCCAGGGCCCCGTCTCGCTCGCCGGCCAGAACATTTCCGTTGCCTCCAGCGGAGATCTTTCGGTGACAACGCTGGCCAACGGCATCGACGGTGCCGTCAGCCTGGTGGCCGGCGGTGCGCTGGCGCTGCCCAACGCGGCGATCGACACCGGCACGGCCGCGCTGACGCTGGCCGCCAACGGTGCCGCGCTCGGCATCGCGCATGAGCTGAGCGGCGGCAACATCTCCATCACCGGCCGCAAGGGCGTGACGCTCCAGGCCGACGTGAGCACCAAGGGCACGCTGACCCTGGCGAGCGACGGCAGCGTGATGCAGACCGCGGGCGTCGTGACCGCCGGCACGCTGACCGGCAGCGCGGGCAGCGTCTCGATGAACCAGGCCAACCAGATTGGCGCGCTGGGCGACTTCACGGCCGTCGGTGCCTTCAGCCTCAGGAACGCGCAGGCGCTGCAGGTGACGGGCAACGTCGCCGCGTCGAGCGTGGCGCTCGATGTAGCCCAGGGCGTCGTGGTCACCGGCTCCATCAGCGCCACCGGCAACAAGGGCGAAGTGATCTCGGTGGCCAGCGACACTCGCCTGCAGGTCGGCAACGGCGGCACTACGGGCGTGCTGGCAGGCAACGTGAGCAACGACGGCACGCTCGCCTTCAACCGCTCCGACGCATTGACTTTCGCGGGCGCCATCGGCGGCAAGGGCGCGCTGGTGCAGCAAGGCCAGGGCACGCTGGTGCTCACCGGCGCCAACAGCTACACCGGCGGCACCACCGTGAAGGCCGGCGTACTGCAAGGCAACGCCACGAGCCTGCAGGGCGACATCGTGAACGACGCGACCGTCGTCTTCGAGCAGACCAAGGCCGGCGGCGGCGGCACCTATGCCGGCACCATGAGCGGCACCGGCAGCCTGCGCAAGATTGGCGACGGTGAACTCGTGCTCGCCTCGGTCAACAGCTACAGCGGCGGCACCTCGGTCGAAGCCGGCACGCTGAACGCCAGCGTCACCGGCGCACTGGGTAGCGGACCGGTCTCGGTCGCCAACGGCGCCGCCGTGCTTTTCAGCGGCAAGGCCGACATGGGCGCGGTAACGCTCTCCAACGGTCCCGACGGCCTCATCAACTTTGTCGGCAGCGTGACCGCGGGGCAGGCCGCCATCGTGAACGGCAAGGGCGGCACCGTCCGCATCAGCGAACTCACGGCCAACGGCACATCGATCGGCTCGCTCGGCGGCGCGGGCCAGGTGGTCCTCGGCGCCAAGACGCTGACCACCGGCGGGCTGAACGCCGACACGGAGATCTCGGGCGTCGTCTCCGGCACCGGCGGCTCGCTGGTGAAAGTGGGCACGGGCGCGCTGACGCTGTCGGGCGCCAACACCTACACGGGCGGCACGACGCTGCGCCAGGGGCGCCTGAACGTCGGCCACAGCCAGGCCCTGGGCGGCGGCACGCTGTCGATGGACGACGACACGACGCTGGGCTTCAGCGCCGACGGCCTGACCATCGCCAACACCATCCATCTGACTGGCCAGCTCGATCCGATCATCGACACCGGCGCGTTCTCGGGCACGCTGAGCGGCGCCATCTCCGGCGGCGGCTTCATCACCAAGGAAGGC
PROTEIN sequence
Length: 1157
MNISFRSLWNDALGAWIAVSEISRSHSGSRSTSRLDSAAKPGEPARRLFRLSALMSVVAVLGAAPFVSASAQSVVIGTTGSGGLGVGIGGDGGAGGIGGGGGGGSGGAPAGGGGGGYGAGGGGAGFTYGSNSGGAGGPGKGGDGGSDTWGQGGAGSNGGASGTNGVQGADGPFGPKNGGNALAAIAEGSTFGGLTSATFSADRTVNGSLGIGGGGGGGAGASGTAAGGDGSSGGAGELTISAGTTTVTGAIVIGGSGGGGGGGSGNANGGRGGDGGNGQLTVSDGKLVADSIVIGGSSGGKGSGGATSGLAGAGATGTLTVTGGSMNVAHGVTVNGNGQVDFKPDAGTQVTAGYAISGAGSVSQTGAGTTVMTGDNTYTGGTTISAGTLQIGAGGTTGSIVGKVSNAGTLVFDRSNTLTFNGTISGTGQVQQIGSGTLELTGANSYEGGTLIGGGTLKVAGDGALGAATGALTFNGGGTLQSTGAFTSARDVTLAGAGSIVSKGALSMSGVFTGNGALDVQAGSGDITLTNAGNDFGGAVSLSGATVQINDKNALTLGTLNTGALTATSHGNLQFQGGGSASSIDVRSNDGAVTQTGALSVMGKLSVDAGTGSIALNNTSNSFQGPVSLAGQNISVASSGDLSVTTLANGIDGAVSLVAGGALALPNAAIDTGTAALTLAANGAALGIAHELSGGNISITGRKGVTLQADVSTKGTLTLASDGSVMQTAGVVTAGTLTGSAGSVSMNQANQIGALGDFTAVGAFSLRNAQALQVTGNVAASSVALDVAQGVVVTGSISATGNKGEVISVASDTRLQVGNGGTTGVLAGNVSNDGTLAFNRSDALTFAGAIGGKGALVQQGQGTLVLTGANSYTGGTTVKAGVLQGNATSLQGDIVNDATVVFEQTKAGGGGTYAGTMSGTGSLRKIGDGELVLASVNSYSGGTSVEAGTLNASVTGALGSGPVSVANGAAVLFSGKADMGAVTLSNGPDGLINFVGSVTAGQAAIVNGKGGTVRISELTANGTSIGSLGGAGQVVLGAKTLTTGGLNADTEISGVVSGTGGSLVKVGTGALTLSGANTYTGGTTLRQGRLNVGHSQALGGGTLSMDDDTTLGFSADGLTIANTIHLTGQLDPIIDTGAFSGTLSGAISGGGFITKEG