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SCNpilot_cont_300_bf_scaffold_214_curated_30

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(31185..33311)

Top 3 Functional Annotations

Value Algorithm Source
ATP-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00037EAFB5 similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 704.0
  • Bit_score: 1185
  • Evalue 0.0
type I secretion system ATPase; K12541 ATP-binding cassette, subfamily C, bacterial LapB similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 702.0
  • Bit_score: 1138
  • Evalue 0.0
Type I secretion system ATPase {ECO:0000313|EMBL:ADU39198.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 702.0
  • Bit_score: 1138
  • Evalue 0.0

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2127
ATGAACGCCAGGGAACTTCCCCGCCAGTACACCAGCTGGCTCGACGCCATGGTCTTCGTGGCGCGCCATTACGGCATCGGCGCCTCCGAGGAGAGCGCGCGCGTCACGCTGGCCTGGGAGCGCGGCGCGCCGCTGGACACGCTGCTCGACCACATGGCGCGCCAGCTCGGCCTGTCGCTGCGGCTGGATGCCTTTTCCGATGCGCAGTTGGACCCCTGGCGGCTGCCGCTGGCGGTGGAGTTCGACGACGGCGAGGTCGGCGTGGTGCGCACCAGCGACGGCAAGGGCCGGCTGGGCGTGCTGCTGGGCGGCGATCACGGGCTGGAGACGGCGGTGGCGGCCGACGAACTGCGCCGCCGGGTGCGGCGCGTGGCCATCCTGCGGCCGCAGACCTCGGTGCCCGACGCGCGGGTGGACGACTACATCCGGCCCTACCAGGCCAACTGGTTCTGGTCGATCGCGCTGCGCGACTGGCGCCGCTACGGCGACATCGTGCTGGCCTCCGTCTTCGCCAACGTGCTGGCCCTCTCCAGCATGGTGTTCTCGATGCAGATCTACGACCGCGTGGTGCCCGCGCAGTCGGAGTCCACGCTGTGGGTGCTGTTCGGCGGCGTGATGCTCGCGGTGGCCTTCGAGTTCCTGTTGCGCATGTCGCGCACGCACATCTCGGACGTGATCGGCAAGCGCGCCGACCTGAAGGTGTCCGACCTGGTGTTCGGCCATGCGCTGCGCGTGCGCAACGACGCGCGCTCCAGGTCCACCGGCTCCTTCATCGCGCAGGTGCGCGAGGTGGAGCAGGTGCGCGAGCTGCTCACCTCCACCACCATCGGCGCGGTGGCCGACCTGCCGTTCTTCCTGCTCTTCGTCGTGGTGCTGTGGATGGTGGCGGGGCCGCTGGCCTGGGTGGCGCTGGCGGCGGTGCCGCTGCTGGTGATTCCGGGGCTGCTGGTGCAGAAGCCGCTGGCGCGGCTGGCCAACGAGGGCATGCGCGAATCGGCGCTGCGCAATGCGCTGCTGGTGGAGGCGGTGGAGGGCATCGAGGACATCAAGCTCATGCGCGCCGAGCCGCGCTTCCAGAACCAGTGGAACCATGCCAACGACGTGGCGGCCAGCGTGAGCATGCGCCAGCGCTTCCTCACCGGGCTGCTCATGACCTGGACGCAGGAAGTGCAGGGCATCGTCTACGCGGTGGTGCTGCTGGCGGGCTGCTTCCTCGTGATGAAGGGCGAGATGACCACGGGCGCGCTGGTGGGCTCGTCGATCCTGGCCTCGCGCATGATCTCGCCGCTGGCGCAGCTGTCGGGCGTGTTCGCGCGCTGGCAGCAGGCCAAGGTGGCGCGCACCGGGCTCGACCAGCTGATGCAGCGGCCGGTGGACCAGCCCGAGCACGCGCGCCGCGTGCACGTGCCGGCGCTGCACGGAAACTACGCGCTGACCAACGCGGAGTTCCGCTACGGCAAGGACGACAAGGCCCCGGCGCTGTCGGTGGCGCAGCTGCAGGTCAAGGCCGGCGAGAAGGTCGCGCTGCTCGGGCGCATGGGCGCGGGCAAGTCCACGCTGCTGCAGCTCATGGCCGGGCTGCACGCGCCGCAGCGCGGGCACGTGTCGCTCGACGCGCTCGACCTGCGGCTGATCGACCCGGCCGACCTGCGGCGCGACATGGGCCTGCTCACGCAGAACGCACGGCTGTTCCACGGCTCGATCCGCGAGAACGTCACCCTGGGCATGCCGATGGCTACCGACACGCAGGTGCTCGAGGCCATCGCGATGGCCGGCGCGCTGCCTTTCGTGCATTCGCGCGCCGAGGGGCTGGACGACCTGATCCACGAGGGCGGGCTGGGCCTGTCGGGCGGGCAGCGGCAGGCGCTGCTGCTGGCGCGCACGCTGATCCGCCAGCCGTCGATCGTGCTGTTGGACGAACCCACCGCGCATTTCGACGAGGTGACCGAGCGCCAGGTGATCGACGCGGTGGGCCGATGGCTCGCGCCGCGCACGCTGGTGGTGGCGACGCACCGCATGCCGGTGCTGCAGTGGGTGGACCGCATCGTGGTGCTCGAGGGCGGCCGCATCGTGATGGACGGATCGAAGGACCAGATCCTCGGAAAGCTCGCCAATGGCCATGCCTGA
PROTEIN sequence
Length: 709
MNARELPRQYTSWLDAMVFVARHYGIGASEESARVTLAWERGAPLDTLLDHMARQLGLSLRLDAFSDAQLDPWRLPLAVEFDDGEVGVVRTSDGKGRLGVLLGGDHGLETAVAADELRRRVRRVAILRPQTSVPDARVDDYIRPYQANWFWSIALRDWRRYGDIVLASVFANVLALSSMVFSMQIYDRVVPAQSESTLWVLFGGVMLAVAFEFLLRMSRTHISDVIGKRADLKVSDLVFGHALRVRNDARSRSTGSFIAQVREVEQVRELLTSTTIGAVADLPFFLLFVVVLWMVAGPLAWVALAAVPLLVIPGLLVQKPLARLANEGMRESALRNALLVEAVEGIEDIKLMRAEPRFQNQWNHANDVAASVSMRQRFLTGLLMTWTQEVQGIVYAVVLLAGCFLVMKGEMTTGALVGSSILASRMISPLAQLSGVFARWQQAKVARTGLDQLMQRPVDQPEHARRVHVPALHGNYALTNAEFRYGKDDKAPALSVAQLQVKAGEKVALLGRMGAGKSTLLQLMAGLHAPQRGHVSLDALDLRLIDPADLRRDMGLLTQNARLFHGSIRENVTLGMPMATDTQVLEAIAMAGALPFVHSRAEGLDDLIHEGGLGLSGGQRQALLLARTLIRQPSIVLLDEPTAHFDEVTERQVIDAVGRWLAPRTLVVATHRMPVLQWVDRIVVLEGGRIVMDGSKDQILGKLANGHA*