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SCNpilot_cont_300_bf_scaffold_214_curated_35

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(58525..59052)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3UC89_ADVKW similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 173.0
  • Bit_score: 249
  • Evalue 2.10e-63
Putative RNA polymerase sigma factor FecI {ECO:0000313|EMBL:AHG64233.1}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella mimigardefordensis DPN7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 173.0
  • Bit_score: 258
  • Evalue 8.30e-66
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 173.0
  • Bit_score: 249
  • Evalue 6.60e-64

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Taxonomy

Advenella mimigardefordensis → Advenella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGGTTGCCGGCGAACCTGCCTTGCAGCAGCAGGTTCACGCCCTCTACAGCGACCATCACGGGTGGCTTTTCGGCTGGCTGCGCGGCAGGCTGGGCAACAGCTTCGATGCCGCCGACATCGCCCACGACACCTTCATGCGCGTCCTGGTCGGGCTGCGCGCCGATGCCATTCCCACGCTGCGCGAACCGCGCGCCTACCTGACCACCGTCGCCAAGCGGCTGGTGATCAACCACGGCCAGCGCCAGTCTCTGGAGCGCGCCTACCTCGCCTCGCTCGCGCTGCTGCCCGAGGCCACCGTGCCGTCCGTCGAGGAGCGCGCGATCCTGCTGGAGACGCTGCACGAGCTCGATGCCCTGCTCGACGAGTTGCCCGCCCGCGCGCGCACCGCGTTCCTGCTGTCGCAGCTCGAAGGGCTGTCCTACGACGACATCGCCGCCCGGCTGCAGGTCAGCGTGCGCACCGTCACGCGCTACATGGCGCAGGGCTTCGCGCAATGCCTGCGGCTGATGCTGGCGCAGCAGCCATGA
PROTEIN sequence
Length: 176
MVAGEPALQQQVHALYSDHHGWLFGWLRGRLGNSFDAADIAHDTFMRVLVGLRADAIPTLREPRAYLTTVAKRLVINHGQRQSLERAYLASLALLPEATVPSVEERAILLETLHELDALLDELPARARTAFLLSQLEGLSYDDIAARLQVSVRTVTRYMAQGFAQCLRLMLAQQP*