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SCNpilot_cont_300_bf_scaffold_214_curated_47

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 81899..82753

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00036608EC similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 278.0
  • Bit_score: 421
  • Evalue 5.00e-115
Variovorax paradoxus strain MEDvA23 contig_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35269.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 278.0
  • Bit_score: 361
  • Evalue 8.70e-97
two component transcriptional regulator, AraC family similarity KEGG
DB: KEGG
  • Identity: 64.4
  • Coverage: 264.0
  • Bit_score: 326
  • Evalue 9.00e-87

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGTCTTACTGGTCGACCACCCCACCGCGGCGCGCGCACATCCTCGTCATCGATGACAACATCGAGGAGCTGCAGTTGCTGCTGGGCGCGCTGCGCGGCGCGGGCCACCGCATCAGCCTCGCGTTCGACGCGCTGCAGGGCTACCGCCGCGTCACCGCCCTGCAGCCCGACCTGGTGCTGCTGGACGTGCGCATGGGCTCGACCGACGGCTTCACCACCTGCAGGCTGCTGAAGGCCGACAGCGCCACCGCGCGCATCCCGGTGATCTTCCTGACTTCGTCGAGCGCGGTGGACGAGCGCATCACCGGCCTGCGCGAAGGCGCGGTCGACTACATCCTCAAGCCCTTCGACCCGGCCGAAGTGCTGGCGCGCGTGGCGGTGCACCTGGCGCTGGCCAGCAGCAGCAGCCATGCGCAGGAGTGCATGGCGCAGGCCGAGAGCGTGCTGGAGAACGCGCGCTCGGACAACGCCGACCGCGTGATCGCGCAGGCGACCGAACGGCTGGTTCTGTCGGATCTGGCAAGCGTGCCCGCGCTGCCCGAGCTGGCGGCACGCGTGGGCACGCACGAGAAGCGGCTGACGCGCGCATTCCGCGAGCAGACCGGGCGCACGGTGTACGAGTTCGTGCGCGAGATGCGGCTGGTGGAAGCCCAGCGCCTGCTGCTGAACTCCGCGCTCAACATGGAAGAAGTGGCGCATGCGGTGGGCTTCTCCGGCGCGGCCAATTTCTCGACCGCGTTCCGCGAGCGCTTCGGGCTCACGCCTTCTTCCTATCGCAACGCACGAGCCGCCCGGCCGATGCCGCCGTTCATGCCTGTGGCGGCGCCATCGACTCTGCCGGCGCCGTCTGCCTGA
PROTEIN sequence
Length: 285
MSYWSTTPPRRAHILVIDDNIEELQLLLGALRGAGHRISLAFDALQGYRRVTALQPDLVLLDVRMGSTDGFTTCRLLKADSATARIPVIFLTSSSAVDERITGLREGAVDYILKPFDPAEVLARVAVHLALASSSSHAQECMAQAESVLENARSDNADRVIAQATERLVLSDLASVPALPELAARVGTHEKRLTRAFREQTGRTVYEFVREMRLVEAQRLLLNSALNMEEVAHAVGFSGAANFSTAFRERFGLTPSSYRNARAARPMPPFMPVAAPSTLPAPSA*