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SCNpilot_cont_300_bf_scaffold_214_curated_53

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(87979..88680)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Variovorax sp. CF313 RepID=J2KW98_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 233.0
  • Bit_score: 438
  • Evalue 5.60e-120
Variovorax paradoxus strain MEDvA23 contig_29, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ31890.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 233.0
  • Bit_score: 438
  • Evalue 7.80e-120
response regulator receiver protein similarity KEGG
DB: KEGG
  • Identity: 97.0
  • Coverage: 233.0
  • Bit_score: 437
  • Evalue 3.00e-120

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGGCAAACATTCTCGTGGTCGATGACGAGCTGGGCATCCGGGACCTGCTCTTCGAAATTCTCAATGACGAAGGCCACAACGTGGAGCTCGCGGAAAACGCCGCCGAAGCGCGCGCGGCCCGCCAGCGCGCGCGGCCGGACCTCGTCCTGCTCGACATCTGGATGCCCGACACCGACGGCGTCACGCTGCTCAAGGAGTGGTCCACCGCCGGCCTGCTGAGCATGCCCGTCATCATGATGAGCGGCCACGCCACCATCGACACCGCGGTCGACGCCACGCGCATCGGCGCATTCGCCTTCCTCGAAAAGCCCATCACGCTGCAGAAGCTGCTCAAGGCCGTCGAGCAAGGGTTGGCGCGCGAGAGCGCACGCCGCGCTGCCGCGGGCGTCGTCCCCGCTCCGGCCGGTGTGGCGCAGGCCACGGCCATCACCACCACCGGCGACAGCCTGCTGATGGCATCGCTCGCTTCCGTGCCGGTGGCCGACATCGGCCCCCAGTCGACTCAGAGCTTCGACCTCGACCGCCCGCTGCGCGATGCGCGCGACGGTTTCGAGAAGGCATACTTCGAGTTCCACCTCGCGATGGAGAACGGGTCGATGACCCGCGTGGCCGAGAAAACCGGCCTCGAGCGCACTCATCTGTACAGAAAACTCAAACAACTTGGTGTTGATTTGTCGAGAGGGCGCAGAAGCGCTGTATAA
PROTEIN sequence
Length: 234
MANILVVDDELGIRDLLFEILNDEGHNVELAENAAEARAARQRARPDLVLLDIWMPDTDGVTLLKEWSTAGLLSMPVIMMSGHATIDTAVDATRIGAFAFLEKPITLQKLLKAVEQGLARESARRAAAGVVPAPAGVAQATAITTTGDSLLMASLASVPVADIGPQSTQSFDLDRPLRDARDGFEKAYFEFHLAMENGSMTRVAEKTGLERTHLYRKLKQLGVDLSRGRRSAV*