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SCNpilot_cont_300_bf_scaffold_214_curated_62

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(103694..104392)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V6J8_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 232.0
  • Bit_score: 439
  • Evalue 1.90e-120
50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 232.0
  • Bit_score: 439
  • Evalue 6.00e-121
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 232.0
  • Bit_score: 439
  • Evalue 2.70e-120

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGTCCAAGATCACCAAGAAGCAAAAGTCGCTCGAAGGCAAGGTCGACAGCAACAAGCTGTACCCGCTGGCTGACGCGATCACCATCGTCAAGGACGCTGCCACCGCCAAGTTCGACGAATCGATCGACGTGGCTGTTCAGCTCGGCATCGATGCGAAGAAGTCGGACCAGGTCGTGCGTGGCGCCGTCGTGCTGCCCAACGGCACCGGCAAGACCAAGCGCGTCGCCGTGTTCGCCCAAGGCGCCAAGGCTGAAGAAGCCAAGGCCGCCGGCGCCGACATCGTCGGCATGGACGACCTGGCTGCCATGGTCAAGGCTGGCGACATGCCTTTCGACGTTGTGATCGCCGCCCCCGATGCCATGCGCGTCGTCGGTACGCTCGGTCAGATCCTCGGCCCGCGCGGCCTGATGCCCAACCCCAAGGTTGGCACGGTGACCCCGGACGTCGCCACGGCCGTGAAGAACGCCAAGGCTGGCCAGGTTCAGTTCCGCGTCGACAAGGCCGGCATCGTGCACGGCACGATCGGCCGTCGCTCGTTCGACAACGACAAGCTGCAAGGCAACCTCGCCGCGCTGATCGACGCTCTGGTCAAGGCCAAGCCGGCGACCAGCAAGGGCGTGTACCTGCGCAAGGTGGCCGTGTCGTCGACCATGGGTCTGGGTGTCCGCGTGGACACGCAAACCATCTCGGCGAGCTAA
PROTEIN sequence
Length: 233
MSKITKKQKSLEGKVDSNKLYPLADAITIVKDAATAKFDESIDVAVQLGIDAKKSDQVVRGAVVLPNGTGKTKRVAVFAQGAKAEEAKAAGADIVGMDDLAAMVKAGDMPFDVVIAAPDAMRVVGTLGQILGPRGLMPNPKVGTVTPDVATAVKNAKAGQVQFRVDKAGIVHGTIGRRSFDNDKLQGNLAALIDALVKAKPATSKGVYLRKVAVSSTMGLGVRVDTQTISAS*