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SCNpilot_cont_300_bf_scaffold_214_curated_61

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(102908..103447)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L10 n=1 Tax=Variovorax paradoxus RepID=UPI00037585E7 similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 179.0
  • Bit_score: 320
  • Evalue 1.00e-84
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 179.0
  • Bit_score: 316
  • Evalue 3.40e-83
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 179.0
  • Bit_score: 315
  • Evalue 1.00e-83

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
TTGAGTCTGAATCGCAGTGAGAAAGAAGCGGTCATCAGTGATGTGACCAGCCTCGCCGCAAAAGCTCAAACGCTCGTGATGGCGGAATACCGTGGCATCACGGTGGCCGATATGACCAAACTGCGCAACGAAGCGCGCAGCAAGGGTGTGAGCCTGAATGTTCTGAAGAACACGCTGGCCCGCCGTGCTGTCGCTGGTAGCCCGTTTGAGATTGTTGGCGACCAGATGACCGGTCCGCTGATCTACGGCTTCTCCGAAGACGCTGTGGCCGCCGCCAAGGTGGTGGCCGATTTCGCGAAGACCAACGACAAGCTGGTCATTCGCGGCGGCGCCTTCGGTGGCAAGGCCCTGGACGTCGACGGCGTGAAGCAACTGGCCAACATCCCTTCGAAGGAAGTGCTGCTGGCGCAATTGCTGGGCTTGATGCAATCCCCGATCTCTCGTACCGCCCGCGTGCTCGCGGCGCTGGCCGAGAAGCGCGGTGGTGGCGAAGCTGCTGAACCCGTCGCCGATGCACCGGCAGAAGCGCAGGCCGCTTGA
PROTEIN sequence
Length: 180
LSLNRSEKEAVISDVTSLAAKAQTLVMAEYRGITVADMTKLRNEARSKGVSLNVLKNTLARRAVAGSPFEIVGDQMTGPLIYGFSEDAVAAAKVVADFAKTNDKLVIRGGAFGGKALDVDGVKQLANIPSKEVLLAQLLGLMQSPISRTARVLAALAEKRGGGEAAEPVADAPAEAQAA*