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SCNpilot_cont_300_bf_scaffold_190_curated_12

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 11653..12639

Top 3 Functional Annotations

Value Algorithm Source
Lactate dehydrogenase-like oxidoreductase n=1 Tax=Variovorax sp. CF313 RepID=J3CT13_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 96.6
  • Coverage: 328.0
  • Bit_score: 632
  • Evalue 2.80e-178
Lactate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:EJL77626.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 328.0
  • Bit_score: 632
  • Evalue 4.00e-178
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein similarity KEGG
DB: KEGG
  • Identity: 95.7
  • Coverage: 328.0
  • Bit_score: 625
  • Evalue 8.30e-177

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 987
ATGAGCAAGCCCAAGATCCTGGTCGCGCGCGCGATCTTTCCCGAGACCATCGAGCGCCTGTCGCAGCATTTCGAGGTCGAGTCGAACCAGTCCGACGAAAGCTGGAGCAAGGATCAGCTCATCGCGAAGCTGCAGGGCAAAGCGGGCGCCTTCACCACCGGCAGCGAGCGCATCGACGCCGCCGTGCTCGACGCCTGCCCCGACCTGAAGATCTGCGCCAACATGGCGGTGGGCTACAACAACTTCGACGTCGACGCGATGGCCGCGCACGGCGTGCTCGGCACCAACGCGCCCGACGTGCTGACCGAGACCACGGCCGACTTCGGCTTCGCGCTGCTCATGGCCACGGCGCGCCGCATCACCGAAAGCGAACACTTCCTGCGCGCGGGCAAGTGGCAGAAGTGGAGCTTCGACATGTTCGCGGGCTCCGACATCCATGGCTCCACGCTCGGCATCATTGGCATGGGCCGCATCGGGCAGGGCATTGCCAAGCGCGGCGCGCACGGCTTCGGCATGAAGGTGATCTATCACAACCGCTCGAAGCTCGACGCCTCGCTCGAAGCCGAATGCAAGGCCAGCTACGTGGGCAAGGAAGAGCTGCTCAAGACGGCCGACCATGTGGTGCTGGTGGTGCCTTATTCGGCCGCTTCGCACCACACCATCGGCGCGGCCGAGATCGCACTGATGAAGCCCACGGCAACGCTCGTCAACATCGCGCGCGGCGGCATCGTCGACGACGCGGCGCTGGCCGTGGCGCTGCGCGAGAAGCGCATCGCCGCCGCCGGCCTCGACGTGTTCGAGGGCGAGCCCAAGGTCCACCCCGACCTGCTGACCGTGCCGAACGTGGTGCTCACGCCGCATATCGCCAGCGCCACCGTGCCCACGCGCCGCGCGATGGCCGACCTGGCGGCCGACAACCTCATCGCCTACTTCGGCGGCAAGGGACCGCTGACGCCGGTGACGCCCGTTCCCGCTGCCTCGAAGTAA
PROTEIN sequence
Length: 329
MSKPKILVARAIFPETIERLSQHFEVESNQSDESWSKDQLIAKLQGKAGAFTTGSERIDAAVLDACPDLKICANMAVGYNNFDVDAMAAHGVLGTNAPDVLTETTADFGFALLMATARRITESEHFLRAGKWQKWSFDMFAGSDIHGSTLGIIGMGRIGQGIAKRGAHGFGMKVIYHNRSKLDASLEAECKASYVGKEELLKTADHVVLVVPYSAASHHTIGAAEIALMKPTATLVNIARGGIVDDAALAVALREKRIAAAGLDVFEGEPKVHPDLLTVPNVVLTPHIASATVPTRRAMADLAADNLIAYFGGKGPLTPVTPVPAASK*