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SCNpilot_cont_300_bf_scaffold_190_curated_63

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 62076..62450

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S6 n=2 Tax=Variovorax RepID=E6VAT2_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 124.0
  • Bit_score: 250
  • Evalue 6.70e-64
30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 similarity KEGG
DB: KEGG
  • Identity: 98.4
  • Coverage: 124.0
  • Bit_score: 250
  • Evalue 2.10e-64
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000256|SAAS:SAAS00020539}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 124.0
  • Bit_score: 250
  • Evalue 9.50e-64

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
ATGCGTCACTACGAAATCATTTTGCTGATCCACCCGGATCAGAGCGAACAAGTTCCGGCCATGCTGGAGCGCTACAAGGGCCTGATCACGGCCGGCGGCGGCAAGATCCACCGCGTTGAAGACTGGGGCCGCCGTCAGCTGGCTTATCAGATCAACAAGCTCAACAAGGCCCACTACCTGTGCGTCAACATTGAAGCCGAACAAGCCGTGATGGGCGAACTCGAACACGCGTTCAAGTTCAACGACGCCGTGCTGCGCCACCTGACCGTTCAGAAGAAGAAGGCCGACACCGGTCCTTCGTCGATGATGAAGACGGTCGAGCGCGAAGAGGCTCGCAAGGCCCAGCAGGCCGAATACGCCGCCAACAACAACTGA
PROTEIN sequence
Length: 125
MRHYEIILLIHPDQSEQVPAMLERYKGLITAGGGKIHRVEDWGRRQLAYQINKLNKAHYLCVNIEAEQAVMGELEHAFKFNDAVLRHLTVQKKKADTGPSSMMKTVEREEARKAQQAEYAANNN*