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SCNpilot_cont_300_bf_scaffold_190_curated_174

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 171104..172135

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC transporter, substrate-binding protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XCH1_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 96.5
  • Coverage: 343.0
  • Bit_score: 654
  • Evalue 4.30e-185
putative ABC transporter, substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 96.5
  • Coverage: 343.0
  • Bit_score: 654
  • Evalue 1.30e-185
Putative ABC transporter, substrate-binding protein {ECO:0000313|EMBL:AGU50602.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.5
  • Coverage: 343.0
  • Bit_score: 654
  • Evalue 6.00e-185

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1032
ATGGCCAACCTCCGCGACCCGGGTCGCCGCAGCCTCCTCAAGACGTCGCTCATCGCAGGCGGACTCTCAGCCGGTGGGCTGCTTTCGGTCGACGCCTTCGCGCAGGGCAAGGCGCGCATCAACATGCAGCTGGGCTGGATCGTCGGCGGCAACCAGATCGGCGAAGTGGTCGCCAAGCGCATGGGCTTCTACGAGCAGGAAGGCATCGACTTCGCGATCCAGCCGGGCGGGCCGAACATCGACGGCGTGGCCATCATCGCCTCGGGCCGCTACGAAGTGGGGCAGGTTTCGTCGAGCCCGTCGATCATGCTGGCGGTGTCGCAGGGCCTGCCGATCAAGTGCTTCGCGGTGGGCGCGCAGAAGCATCCCTACACCTACTTTTCGCTCGCCAAGAACCCGGTGCGCAAGCCGGCAGACCTGGTCGGCAAGCGCGTGGGCATTCCCTCGACGGCGGGCATCCTGCTGCGCGCATTGCTGGCCAAGAACAAGATCGCCGAGAAAGACGTCAAGGTGGTGTCCATCGGCGCCGACATGTCGCCGCTGCTGACGGGTCAGGTCGATGTGGTGACCGGCTGGCTCACCAACACCACCGCCATCAAGGTGCTGGGCCCGGACATCGCCTCGCTCACGCAGTGGGATGCGGGCGTACGCCTCTACGCGCTGCCTTACTACGCGTCGACAAAGACGCTGGAGACCCAGCCCAAGGTGATCGAAGCCTTCCTGCGCGCCACCGCCAAGGGCTGGCATCATGTGCGCGCCAACCGCGACGCGGCGGTCGACATGCTGGTGAAGGAGTACCCGAACCTCAAGCGCGAGGACGAGCGCGTGGCGGTCGACGCGATGCTCGAATATGCCTTCGGCGGCCTGGCGCAGACGCAGGGCTGGGGCGCGATGGACCCGGCCGTGTGGCAGGAGCAGATCGACACCTACGCGGAGCTGGGCCAGTTCACGGCGCGCACGCCTAAGGTGGAAGACGTGATCTCGCTCGACGCGCTCAAGGCCACCGCCGCCGCGCGCGCCATGAAGGGCTGA
PROTEIN sequence
Length: 344
MANLRDPGRRSLLKTSLIAGGLSAGGLLSVDAFAQGKARINMQLGWIVGGNQIGEVVAKRMGFYEQEGIDFAIQPGGPNIDGVAIIASGRYEVGQVSSSPSIMLAVSQGLPIKCFAVGAQKHPYTYFSLAKNPVRKPADLVGKRVGIPSTAGILLRALLAKNKIAEKDVKVVSIGADMSPLLTGQVDVVTGWLTNTTAIKVLGPDIASLTQWDAGVRLYALPYYASTKTLETQPKVIEAFLRATAKGWHHVRANRDAAVDMLVKEYPNLKREDERVAVDAMLEYAFGGLAQTQGWGAMDPAVWQEQIDTYAELGQFTARTPKVEDVISLDALKATAAARAMKG*