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SCNpilot_cont_300_bf_scaffold_276_curated_56

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(56716..57585)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21BI8_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 53.4
  • Coverage: 234.0
  • Bit_score: 237
  • Evalue 1.80e-59
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 234.0
  • Bit_score: 237
  • Evalue 5.60e-60
ABC transporter related {ECO:0000313|EMBL:ABD86248.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 234.0
  • Bit_score: 237
  • Evalue 2.50e-59

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGAGCGCCGCTGTAGCCGACACTTCCTCGGCCTTCGATAGGTCCGCAGCCTCCGCGGCATCGGCCCCCGTCCCGCCCCCGCTTCTGCAGGTGTGCAACCTGCACGCCGGCTACGGCCGCGTGAGCGTGCTCGAAGGCGTGTCGCTCGACGTGCCGGCGCGCGGGCTGGTGGCGCTGGTCGGCAGCAACGGCGCGGGCAAGTCGACGCTGCTGCGCGCGCTCTCGGGCCTGCTTCGCGCGACCGATGGCGAGGTGCTGTTCGACGGGCAGCGCATCGCGGGTGTGTCGCCGGCCGGCATCGTCGGGCGCGGGCTGCTGCACGTGGCCGAAGGCCGGCGGCTGTTTCGCGCGCAATCGGTGCAAGACAACCTGCAGCTGGGCCTGTGGAGCGCGAAGCTGCCGAAGGCCGAGGTGGCGCTGCGCTTCGAGCGCGTGTTCACGCTGTTTCCGGTGCTGCATGAGCGCCAGGGCGCGCGCGCCGGCATTCTGTCGGGCGGCCAGCAACAGATGCTCGCCGTGGCGCAGGCGCTGATGCACGCGCCGCGGCTGCTGATGCTCGACGAACCCTCGCTGGGCCTCGCGCCCTCGGTGATCGACCAGCTGCTCGACGCGGTGGTGCAACTGCGCCGCGACGGCACCGCCATCCTGCTGGTCGAGCAGATGGTGGAGCGCGCGCTGCAGATCGCCGACACCGCCTACGTGCTGCAGAACGGCCGCGTGATCGGCCACGGCCCCGCCGCCGAGCTGCAGCACAGCGCGCTGCTGCGGCAGGCCTATCTCGGCGCTGCGGCGAGCACTGATCCGTCGCCGCCTTCGCTGCCTTCTCCAGGCTCACCCTCTTCCACGCCTCCCACAAGGACACCCGCATGA
PROTEIN sequence
Length: 290
MSAAVADTSSAFDRSAASAASAPVPPPLLQVCNLHAGYGRVSVLEGVSLDVPARGLVALVGSNGAGKSTLLRALSGLLRATDGEVLFDGQRIAGVSPAGIVGRGLLHVAEGRRLFRAQSVQDNLQLGLWSAKLPKAEVALRFERVFTLFPVLHERQGARAGILSGGQQQMLAVAQALMHAPRLLMLDEPSLGLAPSVIDQLLDAVVQLRRDGTAILLVEQMVERALQIADTAYVLQNGRVIGHGPAAELQHSALLRQAYLGAAASTDPSPPSLPSPGSPSSTPPTRTPA*