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SCNpilot_cont_300_bf_scaffold_276_curated_58

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(59389..60267)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI0003778EC0 similarity UNIREF
DB: UNIREF100
  • Identity: 51.9
  • Coverage: 283.0
  • Bit_score: 269
  • Evalue 4.30e-69
ABC transporter permease {ECO:0000313|EMBL:KGF82035.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.6
  • Coverage: 298.0
  • Bit_score: 195
  • Evalue 1.40e-46
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 35.6
  • Coverage: 289.0
  • Bit_score: 186
  • Evalue 8.80e-45

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Taxonomy

Massilia sp. JS1662 → Massilia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 879
ATGTGGATCGACGTCGTCGTCTCCGGCCTCACCGCCGGCAGCCTGTACTGCCTGGTGGCGGTGGGCTTCAACATCCTGTACCGGCCGACCAAGGTCTTCAACTTCGCGCAGGGCGACCTGGTGATGGTGGGGGCCATGGCCAGCGCGCTGCTCATGACGCAGTGGCACTGGCCGTGGGTGCCGGCCTTCGCGGCCGCTGCCGCGGCGGTGGCGCTGCTGGCGTTGCTCGAAGAGCGCGTGGCCGTGGCGCCCGTGCTGCGGCGCAGCGCGAGCGGCACGGGCTGGATCATCACCACGCTGGCCGTCGCGATGATCATGACCAACATCGTCGGCAAGGTCTGGGGCGCCGACCCGATCGTGGTGCCCGCGCCGGCGCCGCTGTCGAACGACATGCTGGGGCTGTCGGCGGTGAACATCTCCAGCTACCAGGCGGCGCTGATCGTGCTGACCATCGCGCTGGTGGCGGTGGTGGAGCTGCTGTACGCCAGCCTGTGGGGCAAGGCCACGCTGGCGGTGGCCGAGGACCGCGACGCGGCGCTGCTGCGCGGCATCGACCCGGTGGCGATCAGCCGCTGGTCTTTCGCGCTCGGCGGTGCCTTTGCCGCGCTCACCGGTGCGCTGGCCGCGCCGGTGCTGAGCGCATCGACCGGGCTGGGCGCCATGCTGCTGCTGAAGGGCTTCGCGGCCGCGGCCATCGGCGGGCTGGGCAGCAACCGCGGCGCGCTGCTGGCGGGCTATCTCATCGGCATGGCCGAGGCGGCCAGCGCGCTGCTGCTGTCGCCGGGCTATCACAACGCGGTGATGCTGGTGCTGGTGCTCGCGGTGCTGCTGGCGAAGCCGGGCGGGCTGTTCAGCTCGCTCGAGGCGCGCACGGTGTAA
PROTEIN sequence
Length: 293
MWIDVVVSGLTAGSLYCLVAVGFNILYRPTKVFNFAQGDLVMVGAMASALLMTQWHWPWVPAFAAAAAAVALLALLEERVAVAPVLRRSASGTGWIITTLAVAMIMTNIVGKVWGADPIVVPAPAPLSNDMLGLSAVNISSYQAALIVLTIALVAVVELLYASLWGKATLAVAEDRDAALLRGIDPVAISRWSFALGGAFAALTGALAAPVLSASTGLGAMLLLKGFAAAAIGGLGSNRGALLAGYLIGMAEAASALLLSPGYHNAVMLVLVLAVLLAKPGGLFSSLEARTV*