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SCNpilot_cont_300_bf_scaffold_276_curated_103

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 106745..107779

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00036E463A similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 327.0
  • Bit_score: 568
  • Evalue 4.00e-159
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 327.0
  • Bit_score: 567
  • Evalue 2.80e-159
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACS18293.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 327.0
  • Bit_score: 567
  • Evalue 1.30e-158

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
ATGATTGATCGTTTGGAAGGCTTGTCCTGGGCGCGGAGCATCAAGGTCCGGCACCTGGAGTCTTTTCTGGTGCTGGACGAGGCGGGCACGCTGACCGAGGCCGCTGCGCGGCTGCACATGACGCAGTCGGCCATGTCGCACTGGCTCTCCGAGTTGGAGCGGGTTGCGGGCACGCCGCTGGTGGTCCGCGGGCGCAAGGTTCAGTTGACGCCCGCGGGCCATCTGCTCAAGCGGTTGGCCCTGACCGTGCTGGGCGACATCGCCCGTACCGGCCGTGAGATGCATGCGGTGGCGGCGGGGCGGGTGCCGCGCCTGAACGTGGGCAGCGTCTGGGCGGGCATCGCCGGTGGCTTGCCCGAAGCCGTGAGCGCATTCCAGCAGCTTCACGCCGACGTGACCGTGTCCTTCCATGACGGCCCGTTCGACAACCTGCTCAAGGGCCTGGAGACGCGTGCCATGGATGCGGTGATCGGCGTCCTGGACGCGCGGGCGCACCAGCCGCAACTGGCACATCAGGTGCTCTTCGAGGACCGGGTGAGCATCGTCATCGGCCAGGGCAGCAGACACTGGGACAGCAACCAGGCGCTGAGCTTTGCCGACACGCTGCACGAAAAGTGGGTCATGCCGCCCTCCGGCACGCTCACGCGCATCCAGCTGGATGCGTATCTCATTGAGCAACAGGCATCGTGGCTGGTGCCCAAGGCAGAGACAGCCTCGCTGGCCATGATGCAGGCCCTGCTGCAAAAGGGCGACTATGTCGGCGTGTGTTCGGGATCCATGGCGGACTACATGGCCTCGCTGGGTCTGTTCAGGAAGCTCGCCGTGGATTCCGACATCCGTTTCGGCCCCATCACCGTGGTATGGAACCGAGAGCACGTTTCGGCCACCCTCATGGACTTCATCGCGTGCCTGACGGCGCATGCGCGGGGCTTGCCTGCGGCATCGGTGCACATGGCATCGGTTGGCTCCGCGCCAAAGGGCCTGATGCCCCGGAGCAAGCTCAAGGGCGCGCCGATCGGGCGATCGCCGCCGTGA
PROTEIN sequence
Length: 345
MIDRLEGLSWARSIKVRHLESFLVLDEAGTLTEAAARLHMTQSAMSHWLSELERVAGTPLVVRGRKVQLTPAGHLLKRLALTVLGDIARTGREMHAVAAGRVPRLNVGSVWAGIAGGLPEAVSAFQQLHADVTVSFHDGPFDNLLKGLETRAMDAVIGVLDARAHQPQLAHQVLFEDRVSIVIGQGSRHWDSNQALSFADTLHEKWVMPPSGTLTRIQLDAYLIEQQASWLVPKAETASLAMMQALLQKGDYVGVCSGSMADYMASLGLFRKLAVDSDIRFGPITVVWNREHVSATLMDFIACLTAHARGLPAASVHMASVGSAPKGLMPRSKLKGAPIGRSPP*