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SCNpilot_cont_300_bf_scaffold_53_curated_19

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 19046..20419

Top 3 Functional Annotations

Value Algorithm Source
hflk protein; K04088 membrane protease subunit HflK [EC:3.4.-.-] similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 458.0
  • Bit_score: 847
  • Evalue 2.50e-243
HflK protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V0T4_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 458.0
  • Bit_score: 847
  • Evalue 7.80e-243
Variovorax paradoxus strain MEDvA23 contig_52, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27860.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 458.0
  • Bit_score: 857
  • Evalue 8.10e-246

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1374
ATGTTCAATCTGAACGACGGCCGATGGGGTCGCGGCGACGAGCCGTCCTCCAACGGCGATCGCCCGGCCGGCAACCGCCCCCCCGATGCCAATCCCCCAGGTGCACCGACACCCCCGCCTTCGGGCAACAACAGCAATAACAACGACCGTCCCCGCGGCCAGGGCCCCAACCAGGGCCCGCCCGACCTCGACGAACTCTGGCGCGACCTCAATCGCAAGCTCGGAGGCTTCTTCGGCGGTGGCAAGGGCGGCGGCAACCGTCCCAGCGGCGGCAACAGCAACGGTGGCGGCAACGGCTACCGCCCCGACATGAAAAACGCAGGATTCGGCCTCGGCCTGGTGGCTGCCGTGGCCGTGCTCATCTGGCTCGGCACCGGCTTCTTCATCGTGAACGAAGGCCAGCAGGCGGTCGTGACGCAATTCGGCCGCTACAAGACGACCGTCGGCGCCGGCTTCAACTGGCGCCTGCCGTACCCCATCCAGCGCCACGAAGTGGTGGTGGTCACGCAGATCCGTTCCACCGACGTGGGCCGCGACGCCATCGTGCGCTCCACGGGCCTGCGCGAATCGGCCATGCTGACCGAAGACGAAAACATCGTCGAAATCAAGTTCGCGGTGCAATACCGCCTGAGCGATGCGCGCGCCTGGCTCTACGAGAGCAAGTCGCCCGCCGAGACCGTCGTGCAGGTGGCCGAGACCTCGGTGCGCGAGGTGGTCGGCAAGATGAAGATGGACGCCGCGCTGGCCGAAGAGCGCGACCAGATCGCACCGCGCGTGCGCACGCTGATGCAGACCATCCTCGACCGCTACAAGGTCGGTGTCGAAGTGGTCGGCATCAATCTGCAGCAAGGCGGCGTGCGTCCGCCCGAGCAGGTGCAGGCTGCGTTCGACGACGTGCTCAAGGCCGGCCAGGAGCGCGAACGCGCCAAGAACGAAGCCCAGGCCTACGCCAACAACGTGGTGCCGCTCGCTACCGGTACGGCTTCGCGCCTGAAGGAAGAGTCCGAAGCCTACAAGGCGCGGATCGTGGCGCAGGCCCAGGGTGATGCCGGCCGCTTCGCCTCGGTGCTGGCCGAGTACCAGAAGGCGCCGCAGGTGACGCGCGACCGCATGTACACCGACGCCATGCAGCAGATCTACGCCAGCACGACCAAGGTGCTGGTCGACAGCAAGCAGGGCTCCAACCTGCTGTACCTGCCGCTCGACAAGCTCATGCAGCAAAGCGGCAACAGCGCGACGCCCACGCCGGTCGACGCGGCCAGCCCCAGCGTCGCCGGCACCGCGCCGGCCCAGTCCTCGGTGATCCCGGTGGCGCCCGTGACGGGCGACGTGCGAGCCCGCGACGGCCGCTCGCGCGACCGCGACGTGCGTTGA
PROTEIN sequence
Length: 458
MFNLNDGRWGRGDEPSSNGDRPAGNRPPDANPPGAPTPPPSGNNSNNNDRPRGQGPNQGPPDLDELWRDLNRKLGGFFGGGKGGGNRPSGGNSNGGGNGYRPDMKNAGFGLGLVAAVAVLIWLGTGFFIVNEGQQAVVTQFGRYKTTVGAGFNWRLPYPIQRHEVVVVTQIRSTDVGRDAIVRSTGLRESAMLTEDENIVEIKFAVQYRLSDARAWLYESKSPAETVVQVAETSVREVVGKMKMDAALAEERDQIAPRVRTLMQTILDRYKVGVEVVGINLQQGGVRPPEQVQAAFDDVLKAGQERERAKNEAQAYANNVVPLATGTASRLKEESEAYKARIVAQAQGDAGRFASVLAEYQKAPQVTRDRMYTDAMQQIYASTTKVLVDSKQGSNLLYLPLDKLMQQSGNSATPTPVDAASPSVAGTAPAQSSVIPVAPVTGDVRARDGRSRDRDVR*