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SCNpilot_cont_300_bf_scaffold_57_curated_5

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(2267..3376)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 369.0
  • Bit_score: 723
  • Evalue 1.10e-205
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-) similarity KEGG
DB: KEGG
  • Identity: 95.7
  • Coverage: 370.0
  • Bit_score: 718
  • Evalue 8.10e-205
thiouridylase n=1 Tax=Variovorax paradoxus RepID=UPI0003767101 similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 370.0
  • Bit_score: 720
  • Evalue 1.20e-204

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1110
ATGGCAAAGCAACGGATCGTGGTGGGACTGAGCGGCGGGGTGGACTCCGCCGTCACGGCGCACCTGCTCAAGCAGCAGGGGCACGAGGTGGTCGGCATCTTCATGAAAAACTGGGAAGACGATGACGACAGCGAATACTGCTCGTCGAACATCGACTTCGTGGACGCGGCCAGCGTGGCCGACGTACTGGGCATCGAGATTGAGCACGTCAACTTCGCGGCCGACTACAAGGACCGCGTGTTCGCCGAGTTCCTGCGCGAATACAAGGCCGGCCGCACGCCGAACCCCGATGTGCTGTGCAACGCCGAGATCAAGTTCAAGGCCTTTCTCGACCACGCCATGCGGCTGGGCGCCGAAAAAATAGCCACCGGGCACTACGCACGCGTGCGCCGCAACGACGCCACGGGCAAGCACGAGCTGCTCAAGGGGCTCGATCCGTCGAAGGACCAGAGCTACTTTCTGCACCGCCTGAATCAGGCGCAGCTGTCGAAGACGCTGTTCCCGGTCGGCGAGCTGCACAAGACCGAGGTGCGCCGCATCGCCGAGGAAATCGGCCTGCCCAACGCGAAGAAGAAGGACTCGACGGGCATCTGCTTCATCGGCGAACGGCCGTTCCGCGATTTCCTCAACCGCTACATCTCGAAGGAGCCGGGCCCGATCAAGGACGACCGCGGCCGCAAGCTGGGCGAGCACCAGGGGCTGAGCTTCTACACGCTGGGGCAGCGGCAGGGTCTGGGCATCGGCGGCGTGAAGGAAAAGGGCGCGCAGCGCGGCTCGGGCGACCATTCGCCGTGGTTCGTGGCACGCAAGGACGTCGAGAAGAACACGCTGTGGGTGGTGCAGGGGCACGACCATCCGTGGCTGCTGTCGTCGGAACTGAAGGCGGACGATGCGAGCTGGGTCTCTGGCGAAGCGCCTGCCGCCGGGAGCTACGGCTCGAAGGCGCGCTACCGGCAGGCCGACGCGGCCTGCGAAATGGGCGCTGGTGAAGGTGGCAACCAGGCGGCGTTCAGCCTGCGCTTCGGCGAGCCGCAGTGGGCGGTGACGCCGGGCCAGTCCGCGGTGCTGTACGACGGTGAACGCTGCCTGGGCGGCGGCGTGATCGTCTGA
PROTEIN sequence
Length: 370
MAKQRIVVGLSGGVDSAVTAHLLKQQGHEVVGIFMKNWEDDDDSEYCSSNIDFVDAASVADVLGIEIEHVNFAADYKDRVFAEFLREYKAGRTPNPDVLCNAEIKFKAFLDHAMRLGAEKIATGHYARVRRNDATGKHELLKGLDPSKDQSYFLHRLNQAQLSKTLFPVGELHKTEVRRIAEEIGLPNAKKKDSTGICFIGERPFRDFLNRYISKEPGPIKDDRGRKLGEHQGLSFYTLGQRQGLGIGGVKEKGAQRGSGDHSPWFVARKDVEKNTLWVVQGHDHPWLLSSELKADDASWVSGEAPAAGSYGSKARYRQADAACEMGAGEGGNQAAFSLRFGEPQWAVTPGQSAVLYDGERCLGGGVIV*