name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_300_bf_scaffold_57_curated_1
unknown
|
Not on your lists |
comp(1..81)
|
NAD(P) transhydrogenase subunit alpha n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D0Y0_VARPS
|
|
SCNpilot_cont_300_bf_scaffold_57_curated_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
525..1241
|
Two component transcriptional regulator, winged helix family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3E8_VARPE
Variovorax paradoxus strain MEDvA23 contig_67, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25629.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
winged helix family two component transcriptional regulator
|
|
SCNpilot_cont_300_bf_scaffold_57_curated_3
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1318..1743
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2KHX0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL79800.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_57_curated_4
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1774..2265
|
ADP-ribose pyrophosphatase n=1 Tax=Variovorax sp. CF313 RepID=J3CWQ0_9BURK
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:EJL79801.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
nudix hydrolase
|
|
SCNpilot_cont_300_bf_scaffold_57_curated_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2267..3376)
|
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-)
thiouridylase n=1 Tax=Variovorax paradoxus RepID=UPI0003767101
|
|
SCNpilot_cont_300_bf_scaffold_57_curated_6
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3521..5248
|
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Variovorax sp. CF313 RepID=J2L3I0_9BURK
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:EJL79803.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
AMP-dependent synthetase and ligase
|
|
SCNpilot_cont_300_bf_scaffold_57_curated_7
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5262..6260)
|
Luciferase family oxidoreductase, group 1 n=1 Tax=Variovorax sp. CF313 RepID=J3CWA1_9BURK
Luciferase family oxidoreductase, group 1 {ECO:0000313|EMBL:EJL79804.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
luciferase family oxidoreductase, group 1
|
|
SCNpilot_cont_300_bf_scaffold_57_curated_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6305..7987)
|
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3E3_VARPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU34633.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_57_curated_9
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8036..8635)
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000361ADC5
Strain MEJ086 contig_63, whole genome shotgun sequence {ECO:0000313|EMBL:KIP96330.1}; TaxID=47880 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_57_curated_10
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8649..10475)
|
VanW family protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3E2_VARPE
vanw family protein
VanW family protein {ECO:0000313|EMBL:ADU34632.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_57_curated_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10448..11053)
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2KHX4_9BURK
Variovorax paradoxus strain MEDvA23 contig_67, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25623.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_57_curated_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11270..11929
|
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3E0_VARPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU34630.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_57_curated_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11940..12617)
|
Nicotinamidase-like amidase n=1 Tax=Burkholderia sp. BT03 RepID=J2HM43_9BURK
Variovorax paradoxus strain MEDvA23 contig_67, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25622.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
isochorismatase hydrolase
|
|
SCNpilot_cont_300_bf_scaffold_57_curated_14
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12670..13050)
|
helicase SNF2 n=1 Tax=Variovorax paradoxus RepID=UPI00036F30F5
snf2 superfamily protein
SNF2 superfamily protein {ECO:0000313|EMBL:ADU34629.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_57_curated_15
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13236..13727
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2L3I5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL79808.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_57_curated_16
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13734..14324)
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CWA3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL79809.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
bioy protein; K03523 putative biotin biosynthesis protein BioY
|
|
SCNpilot_cont_300_bf_scaffold_57_curated_17
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14365..14958)
|
ABC-type cobalt transport system, permease component CbiQ n=1 Tax=Variovorax sp. CF313 RepID=J2KHX8_9BURK
ABC-type cobalt transport system, permease component CbiQ {ECO:0000313|EMBL:EJL79810.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
cobalt transport protein; K02008 cobalt/nickel transport system permease protein
|
|
SCNpilot_cont_300_bf_scaffold_57_curated_18
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14951..15670)
|
ABC-type cobalt transport system, ATPase component n=1 Tax=Variovorax sp. CF313 RepID=J3CWQ5_9BURK
ABC-type cobalt transport system, ATPase component {ECO:0000313|EMBL:EJL79811.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
ABC transporter; K02006 cobalt/nickel transport system ATP-binding protein
|
|
SCNpilot_cont_300_bf_scaffold_57_curated_19
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15740..16582)
|
phosphonomutase n=1 Tax=Variovorax paradoxus RepID=UPI000365F361
PEP phosphonomutase-like enzyme {ECO:0000313|EMBL:EJL79812.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
pep phosphonomutase and related enzymes-like protein
|
|
SCNpilot_cont_300_bf_scaffold_57_curated_20
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16656..17951)
|
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI000363F1DF
MFS permease; K03762 MFS transporter, MHS family, proline/betaine transporter
Probable MFS permease {ECO:0000313|EMBL:CAP45237.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
|
|
SCNpilot_cont_300_bf_scaffold_57_curated_21
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17948..20290)
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035FC492
Uncharacterized protein {ECO:0000313|EMBL:EJL71352.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_57_curated_22
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20287..21699)
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00038212BF
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000313|EMBL:EJL71354.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
class III aminotransferase
|
|
SCNpilot_cont_300_bf_scaffold_57_curated_23
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21803..22720
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000371AB51
Transcriptional regulator {ECO:0000313|EMBL:EJL71355.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
LysR family transcriptional regulator
|
|
SCNpilot_cont_300_bf_scaffold_57_curated_24
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22704..24437)
|
Zinc carboxypeptidase n=1 Tax=Variovorax sp. CF313 RepID=J2L3I9_9BURK
Zinc carboxypeptidase {ECO:0000313|EMBL:EJL79813.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
peptidase, family M14
|
|
SCNpilot_cont_300_bf_scaffold_57_curated_25
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24451..25260)
|
ABC transporter n=1 Tax=Paracoccus sp. N5 RepID=UPI00037D8E67
ABC transporter; K02032 peptide/nickel transport system ATP-binding protein
ABC transporter related protein {ECO:0000313|EMBL:ABL69357.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
|
|
SCNpilot_cont_300_bf_scaffold_57_curated_26
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25250..26098)
|
ABC transporter related n=1 Tax=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) RepID=B9KMD6_RHOSK
ABC transporter; K02031 peptide/nickel transport system ATP-binding protein
ABC transporter related {ECO:0000313|EMBL:ACM02027.1}; TaxID=557760 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain KD131 / KCTC 12085).;"
|
|
SCNpilot_cont_300_bf_scaffold_57_curated_27
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26091..26987)
|
cytochrome C550 n=1 Tax=Oceanicola sp. S124 RepID=UPI0002558172
D-ala-D-ala transporter subunit {ECO:0000313|EMBL:KKB85141.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
D,D-dipeptide transport system permease protein
|
|
SCNpilot_cont_300_bf_scaffold_57_curated_28
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26984..28006)
|
Dipeptide transport system permease protein DppB n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RAN4_9RHIZ
Peptide ABC transporter permease {ECO:0000313|EMBL:KGJ07072.1}; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein
|
|
SCNpilot_cont_300_bf_scaffold_57_curated_29
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28017..29591)
|
Extracellular solute-binding protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C0V9_9RHIZ
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM34718.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
dppA; periplasmic dipeptide transport protein DppA
|
|
SCNpilot_cont_300_bf_scaffold_57_curated_30
Paracoccus sp. 10990, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29647..30117)
|
Uncharacterized protein n=1 Tax=Osedax symbiont Rs1 RepID=S6GG39_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGJ20956.1}; TaxID=1525716 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 10990.;"
GAF sensor protein
|