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SCNpilot_cont_300_bf_scaffold_57_curated_9

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(8036..8635)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000361ADC5 similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 199.0
  • Bit_score: 345
  • Evalue 4.20e-92
Strain MEJ086 contig_63, whole genome shotgun sequence {ECO:0000313|EMBL:KIP96330.1}; TaxID=47880 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.5
  • Coverage: 192.0
  • Bit_score: 200
  • Evalue 2.30e-48
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 197.0
  • Bit_score: 196
  • Evalue 7.60e-48

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Taxonomy

Pseudomonas fulva → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
TTGGCATCGATCGAACAGGCCCGCGCGGCCCTGGCTCCGCATGGCGCGCTGGCGCCGCAGTCCGCGGCCGAACACTGGCGCGGCGACATCGCGCTGCCGCCCGCCATCGAGGTCTTCTACGCGCAGGTCGGCCCGCTCGGCAACTGGATCAACGACCGCGTGGGCCATGCGGGCCTGTCGATCCCGACCGCCGGCAACGACTTCAGCATTCCGCCGCTGGCGCGCCTGTGGCAGCTGCAGGCCGGCTACCGCTGGCACGGAATCACCGGCGAGCGCCTGGCCGAATGGCCCGATCACTGGCTGGTGGTGGCCGACCAGGGCGCGGACCCGTTCATCTTCGACCTGCGCACCGGCGCGATACAGTTCGCCTTCCACGGCGCGGGCGCGTGGCAGGACGACGAGCCGATCTTTGCCGACATCCTCGAGATGGCCGCCTGCCTGGGCACCATGGGCCAAGTGTGGGAAGAGGCGGGCGACGACATCTTCCTGGACGACGACTCCGTCAATCCGCTGTACCGCGCGCGGCTGGTCGAACGGCTGACGCCGCTGCTCGGCGATGCCGGGGCGGCAGGTAGCCTGGCGGATGCGTTCGACTGGTAG
PROTEIN sequence
Length: 200
LASIEQARAALAPHGALAPQSAAEHWRGDIALPPAIEVFYAQVGPLGNWINDRVGHAGLSIPTAGNDFSIPPLARLWQLQAGYRWHGITGERLAEWPDHWLVVADQGADPFIFDLRTGAIQFAFHGAGAWQDDEPIFADILEMAACLGTMGQVWEEAGDDIFLDDDSVNPLYRARLVERLTPLLGDAGAAGSLADAFDW*