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SCNpilot_cont_300_bf_scaffold_57_curated_14

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(12670..13050)

Top 3 Functional Annotations

Value Algorithm Source
helicase SNF2 n=1 Tax=Variovorax paradoxus RepID=UPI00036F30F5 similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 126.0
  • Bit_score: 197
  • Evalue 6.90e-48
snf2 superfamily protein similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 126.0
  • Bit_score: 213
  • Evalue 5.00e-53
SNF2 superfamily protein {ECO:0000313|EMBL:ADU34629.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 126.0
  • Bit_score: 213
  • Evalue 2.20e-52

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGACCGCCTCGAAGCTCCTCTCCGCCATCTCCATCGCCCTGCTGGCCGCCGCCGGTGCCGCCCACGCCGAAACCTACGAAGGCGTGCATCAACTGACCTCGGCCGCCAGCCGCGCCGAAGTCGCCAGCCAGGCCGTCGTGGCCGCGCACAGCGCCAACCCCTACGCCACCGGCGCCAACTCCGGCCCGGCCCAGGTGATCGTGTCGAACACCAGCCGCGCCGCCCTCCGCGCTGAAGCCGTTGCCGCCGCGCACAGCGCCGACCCGTACGCCGAAGGCGCTTCGTCGGGCGTGGCTCCCGTGGTGGCCAGCACCGTGGACCGCGCCGCAGTGCGTGCAGCAGCCCGCGCCGCAGCTCGCGGTGACGCCCTGCCGCTGTAA
PROTEIN sequence
Length: 127
MTASKLLSAISIALLAAAGAAHAETYEGVHQLTSAASRAEVASQAVVAAHSANPYATGANSGPAQVIVSNTSRAALRAEAVAAAHSADPYAEGASSGVAPVVASTVDRAAVRAAARAAARGDALPL*