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SCNpilot_cont_300_bf_scaffold_57_curated_32

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(30946..31569)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Acidovorax sp. CF316 RepID=J1EIL3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 211.0
  • Bit_score: 248
  • Evalue 5.60e-63
Variovorax paradoxus strain MEDvA23 contig_67, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25616.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.4
  • Coverage: 207.0
  • Bit_score: 319
  • Evalue 3.60e-84
negative transcriptional regulator; K07734 transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 208.0
  • Bit_score: 163
  • Evalue 5.70e-38

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGCACACACAGCCTCTCTTCGCGATCGAGGAGCGCGCGGAACTCCTGCGGCTCATGCGCGCCTATCCGCTGGCCACCTTGTTCACCGTCTCGGACGGCACGGCGCAGGCGAACCTGCTGCCGCTCGAGGTATGCGACATCGGCCCCTTCGGCACGCTGCGGGGCCATGTCGCCAGGAGCCATTCGCTGTGGGGCAGCATGCCGGACGGCGGCGGCGCGACCGTCGTCTTCCAGGGGCCGAACGCCTACATCTCGCCGCGCTGGTACGTGAACGGGCAGCGCAGCGGCCGGGTGGCACCGAGCTGGAACTACGTGGCCGTGCAGGCGCAGGGCACGCTGCGCTTCATCGACGATCCGGCCTGGGTGGTGTCGCACCTGGCCGCGCTCACCGCATCGCAGGAAGAAGGGCGCGACCCTGCATGGTCCCTGGGCGACGCTGCGCCCGAGTTCGTCGACGGCGCCGCGCAGCGGCTCGGCGGCTTCGAGATCGAGATACGCACGCTGGCCGGCAAGCGCTTCCTGTCGCAGCAGCGCACGGAAGCCGACCGGCGCAGCCTGATCGAGCACCTGGGGCGCGAGGCATCGCCCTCGGCGCGTGCGCTGGCGGCGTTGATCCGGCCCTGA
PROTEIN sequence
Length: 208
MHTQPLFAIEERAELLRLMRAYPLATLFTVSDGTAQANLLPLEVCDIGPFGTLRGHVARSHSLWGSMPDGGGATVVFQGPNAYISPRWYVNGQRSGRVAPSWNYVAVQAQGTLRFIDDPAWVVSHLAALTASQEEGRDPAWSLGDAAPEFVDGAAQRLGGFEIEIRTLAGKRFLSQQRTEADRRSLIEHLGREASPSARALAALIRP*