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SCNpilot_cont_300_bf_scaffold_59_curated_2

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(1079..2278)

Top 3 Functional Annotations

Value Algorithm Source
Integrase-tyrosine recombinase protein n=4 Tax=Proteobacteria RepID=Q8XW53_RALSO similarity UNIREF
DB: UNIREF100
  • Identity: 98.5
  • Coverage: 400.0
  • Bit_score: 801
  • Evalue 4.30e-229
integrase similarity KEGG
DB: KEGG
  • Identity: 98.5
  • Coverage: 400.0
  • Bit_score: 801
  • Evalue 1.30e-229
  • rbh
Integrase protein {ECO:0000313|EMBL:EKX83051.1}; TaxID=1005395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida CSV86.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 400.0
  • Bit_score: 801
  • Evalue 6.00e-229

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Taxonomy

Pseudomonas putida → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1200
ATGGCAAAGATCAAGCTCACCAAGTCCGCAGTCGATGCGGCACAACCCCAGGCGCAGGCTGTCGAACTCAGGGATACCCTGGTGCCCGGCTTCTTATGCAAGATTACCCCATCGGGCCGCAAGGTGTTCATGCTCCAGTACCGGACGAACGCCGGCGAGCGCCGCAAGCCCGCCTTGGGTCAGTACGGGGAACTGACCGTCGAACAGGCCCGCTCGCTGGCTCAGGAATGGCTGGCCCAGGTGCGCCGGGGCGGCGACCCGGCCGCAGACAAGGCGCAGGCGCGCAAAGCGCCCACGGTCAAAGAGCTTTGCACGAAGTTCATGGAGGACTACTCCAAGCTGCGCAACAAGCCCAGCACCCAGGAAGGCTATCAGAGCGTCATCGACCGCAACATCGTCCCGATGATCGGCCGGATGAAGGTTCAGGACGTGAAGCGCCCGGACGTGGCCGGGATGATGAAGAAGATGACCCACAAGCCGGCCGACGCGAACCGCACGTTCAGCGTCATGCGCCGGATGTTCAATCTGGCCGAGGTGTGGGGCTACCGGCCCGACGGCACCAATCCGTGCCGGCATGTCCCGATGTTCCCCAACGGCAAGGCCACCCACCTCATCAGCGACGAGGACATGGGCAAGCTGTTCCGTCATCTTGAGCATCTGGAGGCCGAGGGACTGGAGAGCTACGTCATCCCGCTGGCGATCCGGCTCCAATTCGAGTTCGCCGGCCGTCGCGGCGAAATCGTCACGCTCCAATGGGATTGGGTGGACTTCGAGAACCGGCGCGTCGTCTGGCCCGACAGCAAGACCGGCGGCATGTCCAAGCCCATGAGCGAGGAAGCCTATCGGCTGCTTTCGGCAGCACCGCGCCGGGACGATTGCCCGTATGTGCTGCCATCCCCGAACCATCCCGGCCAGCACCTGACCACGGGCGAGTATTACAACGGCTGGAGCCGTGCGCTCAAGGCAGCGGGCGCGGCGCATGTAGGCACGCACGGCATCCGTCACCGCTCGGCCACCGACATTGCCAACTCGGGCATCCCGGTCAAGGTCGGCATGGCGCTGACCGCGCACAAGACCGTGGCGATGTTCATGCGCTACGTCCACACCGAGGATGACCCGGTGCGCAAGGCGGCCGAACTGGTGGCGAACCGGCGCAAGACGATCACCGGCGCATCCCGCCCTGCGGAGGCCACGGCATGA
PROTEIN sequence
Length: 400
MAKIKLTKSAVDAAQPQAQAVELRDTLVPGFLCKITPSGRKVFMLQYRTNAGERRKPALGQYGELTVEQARSLAQEWLAQVRRGGDPAADKAQARKAPTVKELCTKFMEDYSKLRNKPSTQEGYQSVIDRNIVPMIGRMKVQDVKRPDVAGMMKKMTHKPADANRTFSVMRRMFNLAEVWGYRPDGTNPCRHVPMFPNGKATHLISDEDMGKLFRHLEHLEAEGLESYVIPLAIRLQFEFAGRRGEIVTLQWDWVDFENRRVVWPDSKTGGMSKPMSEEAYRLLSAAPRRDDCPYVLPSPNHPGQHLTTGEYYNGWSRALKAAGAAHVGTHGIRHRSATDIANSGIPVKVGMALTAHKTVAMFMRYVHTEDDPVRKAAELVANRRKTITGASRPAEATA*