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SCNpilot_cont_300_bf_scaffold_59_curated_8

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(8442..9788)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 449.0
  • Bit_score: 869
  • Evalue 2.60e-249
(dimethylallyl)adenosine tRNA methylthiotransferase n=1 Tax=Variovorax paradoxus RepID=UPI00036E5839 similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 448.0
  • Bit_score: 872
  • Evalue 2.20e-250
tRNA-i(6)a37 thiotransferase protein MiaB; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA similarity KEGG
DB: KEGG
  • Identity: 96.6
  • Coverage: 446.0
  • Bit_score: 857
  • Evalue 1.40e-246

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1347
ATGAAAAAAGTATTCATCAAGACCTTCGGCTGCCAGATGAACGAGTACGACTCGGACAAGATGGCCGACGTGCTCAATGCAGCCCAGGGCTACGAACCCACGCAGAACGTGGACGAGGCCGACCTCATCCTGTTCAACACCTGCTCGGTGCGCGAGAAGGCCCAGGAGAAGGTGTTCTCCGATCTCGGCCGCGTCAAGCACCTGAAGGCCAAGGGCGTGAAGATCGGCGTGGGCGGCTGCGTGGCGAGCCAGGAGGGCCAGGCCATCATCGCGCGCGCTCCCTACGTCGACATCGTGTTCGGCCCGCAGACCCTGCACCGCCTGCCCGAGATGCTGAACGACCGCGAGCGCCTGGACCGCCCGCAGGTCGACATCAGCTTTCCCGAGATCGAGAAGTTCGACCACCTGCCGCCCGCGCGCGTCGAAGGCGCCACCGCCTTCGTGTCGATCATGGAAGGCTGCTCCAAGTACTGCAGCTACTGCGTGGTGCCCTACACCCGCGGCGAGGAAGTGAACCGCCCGCTGGACGACGTGCTGGTCGAGATCGCCGGCCTGGCCGACCAGGGCGTGCGCGAGATCACGCTGCTGGGCCAGAACGTGAATGCCTATCGCGGCAAGATGGGCGACACCGCCGAGATCGCCGACTTCGCGCTGCTGATCGAATACGTCGCCGAGATCCCCGGCATCGAGCGCATCCGCTACACCACCAGCCATCCGAACGAATTCACGCCGCGCCTGATCGAGGCCTACGCCAAGGTGCCGCAGCTCGTGAGCCACCTGCACCTGCCGGTGCAGCACGGCAGCGACCGCATCCTGATGGCGATGAAGCGCGGCTACACCGCCATGGAATACAAGAGCACGGTGCGCAAGCTGCGCGCCATCCGTCCTGAACTCGCATTGAGCAGCGACTTCATCGTCGGCTTCCCCGGCGAGACCGACGACGACTTCAACAAGATGATGAAGCTGATCGACGACTGCCAGTTCGACGCCAGCTTCAGCTTCATCTTCAGCCCGCGCCCCGGCACGCCGGCCGCCGCGCTGCACGACGACACGCCGCACGAAGTGAAGCTCGCTCGCCTGCACACGCTGCAGGCCGTGATCGACGCCAACGTCAAGCGCTTCGGCCAGGCGCTGGTCGGCACCACGCAGCGCGTGCTGGTGGAAGGCGCCTCGCGCAAGGACGCCAACGAACTCATGGGCCGCACCGCCTGCAACCGCGTCGTCAACTTCGAAGGCGACGCGCGCCTGGTCGGCCAGATGACCGACCTGCGCATCACCCGCTCGCTGGCCTACACGCTGCGCGGCGAGGTCGTGACGAACGAATCGCCGATGGCGCTCGCCCACTGA
PROTEIN sequence
Length: 449
MKKVFIKTFGCQMNEYDSDKMADVLNAAQGYEPTQNVDEADLILFNTCSVREKAQEKVFSDLGRVKHLKAKGVKIGVGGCVASQEGQAIIARAPYVDIVFGPQTLHRLPEMLNDRERLDRPQVDISFPEIEKFDHLPPARVEGATAFVSIMEGCSKYCSYCVVPYTRGEEVNRPLDDVLVEIAGLADQGVREITLLGQNVNAYRGKMGDTAEIADFALLIEYVAEIPGIERIRYTTSHPNEFTPRLIEAYAKVPQLVSHLHLPVQHGSDRILMAMKRGYTAMEYKSTVRKLRAIRPELALSSDFIVGFPGETDDDFNKMMKLIDDCQFDASFSFIFSPRPGTPAAALHDDTPHEVKLARLHTLQAVIDANVKRFGQALVGTTQRVLVEGASRKDANELMGRTACNRVVNFEGDARLVGQMTDLRITRSLAYTLRGEVVTNESPMALAH*