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SCNpilot_cont_300_bf_scaffold_59_curated_15

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(16747..17457)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, Crp/Fnr family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UVL6_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 207.0
  • Bit_score: 341
  • Evalue 5.50e-91
Crp/Fnr family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 85.5
  • Coverage: 207.0
  • Bit_score: 341
  • Evalue 1.70e-91
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ADU35249.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 207.0
  • Bit_score: 341
  • Evalue 7.70e-91

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGAAAAGAATAAATTCCAAGCCCTCGGCCTATGCCAGCTGGGACGCCTCCCTGGCCCTCTCGACCCCCTGGGTCGAAGCCACCCATCTGGGCAGCGTCATCAGCCTGCCCGCCGGGGAAGTGCTGGCCCGCGAGGGGGAGCGGCACAGCTACTTTTATCTGCTGCGATCCGGATTCGTTCACTCGACCATCCAGCGCAGCAATGGCGCGGAATTCCTGCTCGAGATATTCGGGCCGGGCGCCATCTTTGGCGAAGGCCCGGCATTTGCCGACCTGCCTCGCCCGACCACCACACGCGTGGTCGCGCCCGCCACCCTGAGCCGCTATCTCCCCGGCGATATCACCAGGAAATTCGCCGCCATGCCGGAGTTGGCGAATTCGCTCATTCAAATGCTCGGCTTCAAGAATCACATGATTGTTGAAAAACTTGCCGGCGTTGCATCGGCGGCGCCCAAGGAGCGGGTGGTGGATTTGCTTTTGCGTATTGCACGATTGCAATCGAATGGCGATTCCCAATTGACGCAGGAATCGACGAATTTTCAGGTCGATCTAACGCACGAGAAAATTGCCGCCATGACGGCGCTGAGCCGGGTCACCGTGACAAGAACCCTGAACTCGCTGGCGCACGAAGGGGTGATTGAAACACGGGCCAAACGGGTCATCATCCACGACGCTTCGGCATTACGTCGTTTGCATTACAAAAATAGTTAG
PROTEIN sequence
Length: 237
MKRINSKPSAYASWDASLALSTPWVEATHLGSVISLPAGEVLAREGERHSYFYLLRSGFVHSTIQRSNGAEFLLEIFGPGAIFGEGPAFADLPRPTTTRVVAPATLSRYLPGDITRKFAAMPELANSLIQMLGFKNHMIVEKLAGVASAAPKERVVDLLLRIARLQSNGDSQLTQESTNFQVDLTHEKIAAMTALSRVTVTRTLNSLAHEGVIETRAKRVIIHDASALRRLHYKNS*