ggKbase home page

SCNpilot_cont_300_bf_scaffold_59_curated_25

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 26048..27058

Top 3 Functional Annotations

Value Algorithm Source
nitrate ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00036B0430 similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 336.0
  • Bit_score: 645
  • Evalue 2.50e-182
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein; K02051 NitT/TauT family transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 94.6
  • Coverage: 336.0
  • Bit_score: 635
  • Evalue 1.10e-179
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein {ECO:0000313|EMBL:ADU35258.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 336.0
  • Bit_score: 635
  • Evalue 4.80e-179

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
ATGAACCGCTTCACCCGCAAAGCCGCCGCGCTCGCCGCCGGCCTCAGTCTTTTGGCCGGCAGCCTGGCCGCGCACGCCGAGGGCCAGATCCGCATTGCCGAGCAGTTCGGCATCGTCTACCTGCTGCTCAATGTGGCGCAGGAGCAGAAGCTCATCGAGAAGCATGCGAAGGCCGCGGGCGTGGATGCCAAGGTCGAATGGGTCAAGCTCTCGGGCGGCTCGGCGGTGAACGACGCGCTGCTGTCCGGCAACATCGAGATCGCCGGCGCCGGCGTGGGGCCGCTGCTCACGCTGTGGGACCGCACCAAGGGCAGGCAGAACGTGAAGGGCGTGGCCTCGCTGGGCAACTTCCCGTATTACCTGGTGACCAACAACCCGAATGTGAAGTCGATCGCCGACTTCACCGACAAGGACCGCATCGCGCTGCCCGCCGTGGGCGTGTCGGTGCAGTCGCGGGTGCTGCAGTTCGCCTCGGCCAAGCTGTGGGGCGACAAGGAGTTCAACAAACTCGACAAGATCAGCGTGGCGGTGCCGCACCCCGACGCAGCGGCGGCCATCATCAAGGGCGGCACCGAGATCACCGGCCACTTCGGCAATCCGCCGTTCCAGGAGCAGGAGCTGGCGGGCAACCCGAATGCGCGCATCGTGCTCAACTCGTACCAGGTGCTGGGCGGGCCGTCGTCGGCCACGGTGCTCTACGCGACCGAGAAATTCCGCAGCGAGAACCCGAAGACCTACAAGGCTTTCGTCGATGCGCTCGACGAGGCGGCGAAGTTCGTCACTGCCAATCCGGAGAAGGCGGCGGACATCTACCTGAAGGTGAGCAACGCCAAGCTCGACCGCGAACTGCTGCTGAAGATCATCAAGAACCCCGAGGTGCAGTTCAAGACCACGCCGCAGAACACCTATCCGCTGGCGGAGTTCATGCACCGGGTGGGCGCGATCAAGAACAAGCCGGCTTCGGTGAAGGACTATTTCTTCGACGATGCGCAGAATTCGTCGGGGAATTGA
PROTEIN sequence
Length: 337
MNRFTRKAAALAAGLSLLAGSLAAHAEGQIRIAEQFGIVYLLLNVAQEQKLIEKHAKAAGVDAKVEWVKLSGGSAVNDALLSGNIEIAGAGVGPLLTLWDRTKGRQNVKGVASLGNFPYYLVTNNPNVKSIADFTDKDRIALPAVGVSVQSRVLQFASAKLWGDKEFNKLDKISVAVPHPDAAAAIIKGGTEITGHFGNPPFQEQELAGNPNARIVLNSYQVLGGPSSATVLYATEKFRSENPKTYKAFVDALDEAAKFVTANPEKAADIYLKVSNAKLDRELLLKIIKNPEVQFKTTPQNTYPLAEFMHRVGAIKNKPASVKDYFFDDAQNSSGN*