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SCNpilot_cont_300_bf_scaffold_59_curated_27

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 28103..28972

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI00036BCC24 similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 289.0
  • Bit_score: 540
  • Evalue 7.60e-151
Variovorax paradoxus strain MEDvA23 contig_135, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16269.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 289.0
  • Bit_score: 544
  • Evalue 1.30e-151
binding-protein-dependent transport systems inner membrane component; K02050 NitT/TauT family transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 289.0
  • Bit_score: 539
  • Evalue 6.90e-151

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGAGCACCCTCACGCCTCCCATCCGCCCCGAATACGAGCGCCAGCTCGAGCCCTTCACCGAGCTGCCGGTCGAACGCACGCTGCCGCTGGGCACGCGCATCTGGTCGCAAGCCTGGCTGCGCAAGGGCCTGATCCTCGTCGTCATTGCGGTGCTGTGGGAGCTGGCGGCCCGCTGGCAGGACAACGACCTGCTGCTGCCCACCTTCACCGCCACGGCGCGCGCGCTGGTCGAGGGGCTGGCCAGCGGCGAGCTGATCGAGAAGGTGCGCATCTCGCTGGCGGTGCTGCTGCAGGGCTATCTGGCCGGCGTGCTGCTGGCCTTCGCGCTCACCACGCTCGCCGTGTCCACGCAGATCGGCCGCGACCTGCTGGACACGCTCACCTCCATGTTCAACCCGCTGCCCGCCATCGCGCTGCTGCCGCTGGCGCTGCTGTGGTTCGGGCTGGGCCGGGGCAGCCTGGTGTTCGTGCTGATCCATTCGGTGCTGTGGCCGCTGGCGCTCAATACCTATGCGGGCTTCCAGGGCGTGCCCGAAACCCTGCGCATGGCCGGGCGCAACTACGGGCTCAAGGGCCTGCGCTACGTGCTGCAGGTCCTGGTGCCGGCCGCGCTGCCGTCGATCCTGTCGGGGCTGAAGATCGGCTGGGCTTTTGCCTGGCGCACGCTGATCGCGGCCGAACTGGTGTTCGGCGCCTCGTCGGGCAAGGGCGGGCTGGGCTGGTACATCTTCCAGAACCGCAACGAGCTGTACACCGACCGCGTGTTCGCCGGCCTGGCGATGGTGGTGCTGATCGGCCTGCTGGTCGAAAGCCTGGGCTTCAAGACGCTGGAGCGGCTTACGGTACGCCGTTGGGGCCAGCAGCGCTAG
PROTEIN sequence
Length: 290
MSTLTPPIRPEYERQLEPFTELPVERTLPLGTRIWSQAWLRKGLILVVIAVLWELAARWQDNDLLLPTFTATARALVEGLASGELIEKVRISLAVLLQGYLAGVLLAFALTTLAVSTQIGRDLLDTLTSMFNPLPAIALLPLALLWFGLGRGSLVFVLIHSVLWPLALNTYAGFQGVPETLRMAGRNYGLKGLRYVLQVLVPAALPSILSGLKIGWAFAWRTLIAAELVFGASSGKGGLGWYIFQNRNELYTDRVFAGLAMVVLIGLLVESLGFKTLERLTVRRWGQQR*