ggKbase home page

SCNpilot_cont_300_bf_scaffold_84_curated_57

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 55332..55595

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S16 n=3 Tax=Variovorax RepID=RS16_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 87.0
  • Bit_score: 166
  • Evalue 9.00e-39
rpsP; 30S ribosomal protein S16 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 87.0
  • Bit_score: 166
  • Evalue 2.80e-39
30S ribosomal protein S16 {ECO:0000255|HAMAP-Rule:MF_00385}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 87.0
  • Bit_score: 166
  • Evalue 1.30e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
ATGGTCGTCATTCGACTCTCCCGCGGCGGCTCCAAAGGCCGTCCGTTCTTCAACATCGTCGTGTCGGACAAGCGCGTTCGCCGCGATGGCCGTTTCATCGAGCGCCTGGGTTTCTACAACCCGACCGCCAAGGAAAACGAAGAAAGCATCCGCATCGCCCAGGACCGCCTGGCGTACTGGAAGAGCGTCGGCGCACAAGCTTCGCCCACCGTTCTGCGCCTGATCAAGCAAGCTGCCGCGGCAGCTCCCAAGGCGGCGGCCTAA
PROTEIN sequence
Length: 88
MVVIRLSRGGSKGRPFFNIVVSDKRVRRDGRFIERLGFYNPTAKENEESIRIAQDRLAYWKSVGAQASPTVLRLIKQAAAAAPKAAA*