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SCNpilot_cont_300_bf_scaffold_112_curated_4

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(3731..4867)

Top 3 Functional Annotations

Value Algorithm Source
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Herbaspirillum seropedicae RepID=UPI00031F3891 similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 378.0
  • Bit_score: 448
  • Evalue 6.70e-123
Branched-chain amino acid ABC transporter periplasmic protein {ECO:0000313|EMBL:EOA06593.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 378.0
  • Bit_score: 440
  • Evalue 2.00e-120
branched-chain amino acid ABC transporter periplasmic protein; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 373.0
  • Bit_score: 438
  • Evalue 1.70e-120

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Taxonomy

Herbaspirillum frisingense → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1137
ATGAACATCCAACGACGCATGGCCCTGCTGGCCGCCGCCGCGCTGGCCGCTTTCTCGGCGCACGCGGAGATCGTCATCGGCGCCAGCTTCTCCATCACCGGACCGGCCGCGGCGCTGGGCATCGCGCCGCGCAACACGATGCAGCTTTTTCCCGAGCAGATCGGCGGCGAGAAGCTGCGCATCGTCGTGCTGGACGACGCCACCGACTCGACGGGCGGGGCCAGGAATGCACAGCGGCTCATCACGGAAGAAAAGGCGGACCTGATCATCGGCTCGACGGCGAGCCCGCCCGCGCTGGGCATCGCCGAGGTCGCGCTGCTGTCGCAGACCGTTCAACTGGCCGCCGCGCCGATCGAGCTGGCCGATGGCCGCGACAGCTTCACCTTCCGTCTGCCGCAAGGCATTGCGCTGATGGCCGAAGGCACGGTCGAGCAGATGAAGAAATCGGGCATCAAGACCTTCGCCTTCATGGGCTACTCCGATGCCTACGGCGAGAGCTGGTTGCGCGAGATGAAGCGCTACGCCGACAAGGCGGGCATCCGGCTCGTGGGGACCGAACGCTTCTCGCGCACCGACATGACGGTGGTGTCGCAGGCGCTCAAGGTGCTGGCCGGCAATCCGGACGCCGTGCTCGTCGTCGCATCGGGCAGTGGCGCGGTGATGCCGCAGAAGGCGCTGGTGGAGCGCGGATACCGGGGCAAGGTCTACCAGACCTACAGCGCCGTGGCACCCGATCTGCTTCGCATGGGCGGCAAGGACGTGGAAGGCACGCTGGGGCTGTCGGGCCCCGCCGTCGCGGCAGACCAGTTGCCGGACACCCATCCGTCGAAGAAGGTGGCTCTCGATTTCATCAGGCTCTACGAGTCGAAATTCGGCGCCGGCAGCTACAACCAGTTCGCCGCCAACATCTGGGGCGCGAAGCTGCTGCTCGACAAGGCGATTCCGATTGCGCTCAAACAGGCCAGGCCGGGGACGCCGGCGTTCCGTCTCGCCTTGAAGGACGCGCTGGAGACGATGGGCGAGGTCCTCGTGCCGCAAGGCGTGCTTCGGTACTCGACCAGCGATCACTACGGCTATGACGGCCGCGCCCGGTTCGTGCTCAGTGCCCAGGGTGGCGTCTGGCGCGGGGTCAACTAG
PROTEIN sequence
Length: 379
MNIQRRMALLAAAALAAFSAHAEIVIGASFSITGPAAALGIAPRNTMQLFPEQIGGEKLRIVVLDDATDSTGGARNAQRLITEEKADLIIGSTASPPALGIAEVALLSQTVQLAAAPIELADGRDSFTFRLPQGIALMAEGTVEQMKKSGIKTFAFMGYSDAYGESWLREMKRYADKAGIRLVGTERFSRTDMTVVSQALKVLAGNPDAVLVVASGSGAVMPQKALVERGYRGKVYQTYSAVAPDLLRMGGKDVEGTLGLSGPAVAADQLPDTHPSKKVALDFIRLYESKFGAGSYNQFAANIWGAKLLLDKAIPIALKQARPGTPAFRLALKDALETMGEVLVPQGVLRYSTSDHYGYDGRARFVLSAQGGVWRGVN*