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SCNpilot_cont_300_bf_scaffold_112_curated_12

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(11965..13377)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037BE334 similarity UNIREF
DB: UNIREF100
  • Identity: 46.5
  • Coverage: 396.0
  • Bit_score: 326
  • Evalue 6.20e-86
Variovorax paradoxus strain MEDvA23 contig_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ36871.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.1
  • Coverage: 479.0
  • Bit_score: 406
  • Evalue 6.60e-110
RSp0820; hemagglutinin-related protein similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 462.0
  • Bit_score: 257
  • Evalue 8.50e-66

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1413
ATGTCGTTCCCGTGCCATACCTTCCTGTCAGGCCGCCGTCTTTGGGCGGCGGCATTTCTTGTCGCGCTGGCGTCGTGCGGTGGTGGAGGAGGGGATGGCGGCGCGGGATTCGTGGCGCTGCCGGTGTCCACGGCGCCAACGGCACCCGAAGGACCCACCCCGCACCACAGCGTGAGCGGAACGGTCAGTGGCCTGCTGGGCACGGGCCTGGTTTTGCAGAACAACGCCGGCGATGACCTGGTTGTCGCGGCCGATGGCAGCTTCACCTTCCCGACCTCGGTGGCAAAGGGTGGCGCTTACGCGGTGACGGTCAAGGCACAGCCGAAGATCCTGACCCGCACATGCACCGTCAGCCAGGGCAGCGGAACGATGGCCGACGCCGCCGTGACCGATGTATCGGTCGCCTGTGCGGCGCCGGCGGCGCGTTTTGCCCATGTGCTGAACAACGACAGCACCGTCTCTTCCTACACCATCGATGCGGTGTCCGGCGCGCTGGGTACGGCTTTCAACTCGCCGACCTCGATGTTGGGCTTCCCCGCCGGCATTGCCGCGCATCCATCGGGGCGCTTCGTGTACGTGGCGGGTTTTTCGAGCGGGGCCGTCCATGCATTCTCTGCCGACACCGCATCGGGACGCCTGAGCCAGATCGGGAGCGGCGTTGCGATCCCGGGAGGCAGCGCCAGGCGCATCGTCGTGGATCCCACCGGCCGGTTTGCCTATGTGGCGATCGCCGGCTCCGGCTCCAGGTTGCTGACCTACGCCATCGACCAGGTGTCGGGCGCGCTTTCGTTCAGTTCTTCGGTGGCTGTGGGAGCCAACCCCCTCGGTCTCACCGTGGACCCCATGGGCCGGTTCGTCTACGTCACGAGTGAAATCGACGATAACGTGAGGGCATTCGCCATCGACGATACGTCTGGCAGTCTCGGCGCGGTGTCATTGGTGAACACCGGGCCTGCGCCTTCGCCCGTCGCGGTGGACCCTGCCGGTCGATTCGCCTATGTCGCGAATCGCAACGCCGACAGCCTGTCGTCCTACCCCATCGATGCGACGTCCGGCGCGCTGAGTGCTGGGGGCGTGTCCACGGTGCGGACGGGAAGAGGGCCCATCTCGATCGCCACGGATGCCACCGGCCGATTTGTCTATACGGCGGATTACTCCGATGGCACCGTGAGCGGCTTCACCGTCGATGCGGCTTCCGGAGCCCTCGCGCCGATGACGCCGAGTGTTGTTGCCAGTAATGTCAATGTCCCGGTTTCCATTGTGTTGGACCCCACCGGCCGATTCGTCTACGTCGTTCAACTGGGGGGCGACACCGTGTCTGTCTACGGCATCGATGCGATGTCCGGTGCCCTGAATGCAAAGTCATCGTCTCGCACGGGGATGGTTCCGCTGGGCATCGCTTTTTCGAGGTGA
PROTEIN sequence
Length: 471
MSFPCHTFLSGRRLWAAAFLVALASCGGGGGDGGAGFVALPVSTAPTAPEGPTPHHSVSGTVSGLLGTGLVLQNNAGDDLVVAADGSFTFPTSVAKGGAYAVTVKAQPKILTRTCTVSQGSGTMADAAVTDVSVACAAPAARFAHVLNNDSTVSSYTIDAVSGALGTAFNSPTSMLGFPAGIAAHPSGRFVYVAGFSSGAVHAFSADTASGRLSQIGSGVAIPGGSARRIVVDPTGRFAYVAIAGSGSRLLTYAIDQVSGALSFSSSVAVGANPLGLTVDPMGRFVYVTSEIDDNVRAFAIDDTSGSLGAVSLVNTGPAPSPVAVDPAGRFAYVANRNADSLSSYPIDATSGALSAGGVSTVRTGRGPISIATDATGRFVYTADYSDGTVSGFTVDAASGALAPMTPSVVASNVNVPVSIVLDPTGRFVYVVQLGGDTVSVYGIDAMSGALNAKSSSRTGMVPLGIAFSR*