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SCNpilot_cont_300_bf_scaffold_112_curated_19

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 21571..24597

Top 3 Functional Annotations

Value Algorithm Source
diguanylate cyclase n=1 Tax=Variovorax paradoxus RepID=UPI00037180B1 similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 999.99
  • Bit_score: 1535
  • Evalue 0.0
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ACS17369.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.2
  • Coverage: 999.99
  • Bit_score: 1222
  • Evalue 0.0
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 999.99
  • Bit_score: 1222
  • Evalue 0.0

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3027
GTGAAGCCGCACTTCCCGCGCCGCGCTACCGCCATCGTCTATGGCGTGGCCGTGCTTTTCCTGGCCACGGTGGCGGCTGTGGCCAGCCTCATCATCTGGGACGGGCGCCAGAAGGCGATCAGCGACCACGAGAACCTTGCGGTGCGCTTTGTCAGCGGCTCCGAGGCGGCGCTCAACCGCTCGCTGCTGAGCGTGGACATGCTGCTGGCCGGCGCCAACGAACTGCTGCGCGGCGCCACCGTCGGCAGCGCCGGTGTCGAATTGGGCCGTTTCGAGGACCACCGGCTGCTCGACAACGTGGTGCGGCAGAACCTGCTGGTGCGCCACATCGCCTTTGTCGACGCGCGCGGCGTCGTGGTCGCCTCGTCCGACCGGCGCGGCGCGCGGCTGCCGCTGGCGCTGCCCGCCGGCTTCATCGACAGCGTGCTGGCCAACCCCGTGTCCACCCTGGCCATCAGCGCGCCGACCATCAGCCTCGTCACCTCGCAGAAGGTGCTGTTCTTTGCGCGCGCCGCGACACTGGCCGACGGCTCGCGCATGGTGGCGGTGGCCGAAGTGCAGCTCTCGCTGCTGGCCACCATCATGACCCAGGGCGCCGGCATCCGCGGCCTGGAGGTCACGCTGGAGCGCGACGGCGGTCCGCTGCTGGCCAGCCTGCCGCCGCGCGACGACCTCGACGGCAAGCGCATCGAACCGGCACTGCACGAGCAGACCAGCGACGGCAAGCCCTCCCGCATGGCCGCGCGCCTGAGCGGCCTGCCGGCCATCGTGGTGGCCCGCCCGACACTGCACCGCAATCTGCTGATCGTCGCGAGCATTCCCCTGACCGCGGCGCTGCGCGATTGGCGCCGCGAGCGCGACCTGATCGCATGGACGGCCGTCGCCATCGGCCTGATGATCCTGGCGGTGGCGCGCTTCACCCACATCCAGCTGCGCCGCCAGTGGCGCGCGCAGATGGAGTTGCTGCGCTCCAAATCCACGCTCGACCAGGCGCTGGAGTCGATGATCGACGGCTTCATCCTGCTCGATTCGGACAACCGCGTGCTCACCTGGAACCGCGGCTTCGTCGCCATGTTCCCGTGGGTCGCGCCGATGATCGCGCCGCAGCTGCCCTTTCGCCGCATCGTGGACGAGACCGCCAGGCATGTGGTGCACGAGCAGGGCCCCGCCGACTGGACGGCCCGGAACTTGCCGCAGATGGAGCTGCCCTACTCCGAGCAGGAGGCGCTGCTGCAGGGCGGCCAGGTGATCCGCGCCGCGCGCAGCCGCACGCCCGACGGCGGCATCGTCTGCGTCTACCAGGACATCACCGAGAAGCGCCGCCACATGGCGGCCATCATCGAGAGCAAGGCGCAGCTGCAGGCCACGCTGGATGCGCTGCCCGACCTGCTGCTCGAGGTCGGGCTGGACGGGCGCTGCCACGGCTACCACGCGCCGCGCGCGCCGGTCCCGGCCATCGACGTCGAGAACCCGGTCGGCCATACGCTGTCCGAGCTGCTGCCCGCCGAGGCGGTCGCACAAGTCATGGCCGCGCTGCGCGACGCCGACGCCAGCGGCCATTCGGCGGGGCGCCAGTTCGAGCGGCGCCACGCGCACGACAAAGACTGGTTCGAGATCTCGGTCTCGCGCAAATCGATCGGCGCCGGCGAGGACGCGCGCTTCATCGTCATCCTGCGCAACATCACGGAAAGCAAGCGCGCGGCGCGCGAGATCGAGCACCTCGCCTTCTACGACACGCTCACCGGGCTGCCCAACCGCCGGCTGCTGCTCGACCGGCTCAAGCGGGCCATCGGCGCCACCGCCCGGGGCTCGCGCCGGTGCGCGCTGCTGTTTCTGGACCTCGACAACTTCAAGACGCTGAACGACGCGCTCGGCCACGACATCGGCGACGTGATGCTCAAGCAGGTGGCGCAGCGGCTGCAGGACTGCCTGCGCGAAGGCGACATGGTGGCGCGGCTGGGCGGCGACGAGTTCGTGGTGATCCTGGAGGACCTGAGCACGCAGACCGTCGTCGCCACCTCGCAGACCGAGACCATGGGCGCGGCCATCCTCGCGCGGCTGAACAAGCCTTACCAGCTCGGCCTGCAGCAGCATCACAGCACCTGCAGCATCGGCGCCGCGCTCTTCGACGCGAAGAACGCCTCGATGGAAGAAGTGCTCAAGCAGGCCGACATCGCGATGTACTACGCCAAGACCGACGGCGGCAACGCGCTGCGCTTCTTCGAGGCGGGCATGCAGACCACCATCACCGCGCGCGCCACGCTGGAAAGCGAGTTGCACACGGCCATCGCCGACCGGCAGTTCGTGCTGCATTTCCAGAGCCAGGTCACGCACGAGAACAAGGTGACGGGCGCGGAGGTGCTGGTGCGCTGGCGCCATCCGGTGCGCGGCCTGCTGCTGCCGCACGAATTCATCGACGTGGCGGAGGACACGGGGCTGATCATCCCGCTGGGTCTCTGGGTGCTGGAGACGGCCTGCGCGCAGCTGATGGCCTGGCGCGACGACCCGCGCCGCCGCCACCTGCAGTTGTCGGTGAACGTGAGCGCGCGGCAGTTTCGCGAGCAGGACTTCGTCGATCAGGTGCGCTTGGTGTTCAAGCGCACCGGCGCCGACCCGCGCAAGCTCAAGCTGGAGCTCACCGAGAGCCTGCTGCACGAAAAAGTGATCGACGCCATCGGCAAGATGAACGCGCTGGCCGCGCTCGGCATCCAATTCTCGATGGACGATTTCGGCACGGGCTATTCGTCGCTGTCGTACATGACGCAGCTGCCGCTGAGCCAGATCAAGATCGACAAGTTCTTCGTGCACAGCATCGGGCTGAACCCGAAGGTGGAGCTCATCATCCAGACGATCATCGGCATGGCCCGCAACCTCGAGCTGCAGATCGTGGCCGAGGGCGTGGAAACACAGGCGCAGCGCGACTTCCTCGAGCGCCACGGCTGCCGCGTGTGCCAAGGCTACCTGTTCGGCAGGCCCCAGCCGCTGCAGGTGTACGAAGGCGAACTCGACTTCGACACCGCGGCCTGA
PROTEIN sequence
Length: 1009
VKPHFPRRATAIVYGVAVLFLATVAAVASLIIWDGRQKAISDHENLAVRFVSGSEAALNRSLLSVDMLLAGANELLRGATVGSAGVELGRFEDHRLLDNVVRQNLLVRHIAFVDARGVVVASSDRRGARLPLALPAGFIDSVLANPVSTLAISAPTISLVTSQKVLFFARAATLADGSRMVAVAEVQLSLLATIMTQGAGIRGLEVTLERDGGPLLASLPPRDDLDGKRIEPALHEQTSDGKPSRMAARLSGLPAIVVARPTLHRNLLIVASIPLTAALRDWRRERDLIAWTAVAIGLMILAVARFTHIQLRRQWRAQMELLRSKSTLDQALESMIDGFILLDSDNRVLTWNRGFVAMFPWVAPMIAPQLPFRRIVDETARHVVHEQGPADWTARNLPQMELPYSEQEALLQGGQVIRAARSRTPDGGIVCVYQDITEKRRHMAAIIESKAQLQATLDALPDLLLEVGLDGRCHGYHAPRAPVPAIDVENPVGHTLSELLPAEAVAQVMAALRDADASGHSAGRQFERRHAHDKDWFEISVSRKSIGAGEDARFIVILRNITESKRAAREIEHLAFYDTLTGLPNRRLLLDRLKRAIGATARGSRRCALLFLDLDNFKTLNDALGHDIGDVMLKQVAQRLQDCLREGDMVARLGGDEFVVILEDLSTQTVVATSQTETMGAAILARLNKPYQLGLQQHHSTCSIGAALFDAKNASMEEVLKQADIAMYYAKTDGGNALRFFEAGMQTTITARATLESELHTAIADRQFVLHFQSQVTHENKVTGAEVLVRWRHPVRGLLLPHEFIDVAEDTGLIIPLGLWVLETACAQLMAWRDDPRRRHLQLSVNVSARQFREQDFVDQVRLVFKRTGADPRKLKLELTESLLHEKVIDAIGKMNALAALGIQFSMDDFGTGYSSLSYMTQLPLSQIKIDKFFVHSIGLNPKVELIIQTIIGMARNLELQIVAEGVETQAQRDFLERHGCRVCQGYLFGRPQPLQVYEGELDFDTAA*