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SCNpilot_cont_300_bf_scaffold_112_curated_29

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 33446..34417

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000361F6F5 similarity UNIREF
DB: UNIREF100
  • Identity: 91.2
  • Coverage: 320.0
  • Bit_score: 577
  • Evalue 6.20e-162
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 311.0
  • Bit_score: 297
  • Evalue 5.10e-78
Putative transcriptional regulator, LysR family {ECO:0000313|EMBL:ABF10901.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.1
  • Coverage: 311.0
  • Bit_score: 297
  • Evalue 2.30e-77

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Taxonomy

Cupriavidus metallidurans → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 972
TTGCCCACCGCCCGAGACCCCGCCGTCGAGCTGCATCGCACGCTGCTCTCCCGCCTCAAGCTGCGGCAACTCTCGCTGCTGCAAGCCATCGACCGGCATCGCACGCTCAGCCGTGTCGCCACCGAGATGCAGCTCAGCCAGCCGGCAATCACCAAGGCGCTGCACGAGGTCGAGGACATCTTCGGCAGCACGCTGTTCGAGCGCTCCAGCAGAGGGCTCGTGCCCACCGCCGCGGGCGATGCGGTGCTGCATTACGCGCGGCGCTGGCTGGCCGAGCTGGAGGCGACCACGCGCGTGCTCACCTCGCTCGAGGCGGGCCGCAGCGGCCGCCTGCGTCTGGGCTTCACGCAGCAGGTGCCGCAGCAGCTCATGTCGGCCGCGTTGACGCATCTGCTCGACCGCTCACCGCGCATTTCGGTGATGGTGCGCGAGGGCACCACGGACGAACTGGTCGCCTGCCTCGTCGCACGCGAACTCGACTGCGCCATCGGCCGCTCCTACGACGGTGACGCAAGCGGGCTGGTGCAGGAGGCCATCCACGAGCAGGAGCCCTGCCTCGTGGTCGGCGCGAAGAACGTCAAGCGCCTCTCGCGCGGGCCGCTGGACTGGGCGCGGCTCGCGCAGCTCGACTGGATCCTGCCGCCGCCCAACACGCCCATGCGCAGGACCTACAACGCGATCTTCGTCGGCGCGGGCGTTCAGCCGCCGCTGCCCATCCTGGAGACCACCGCGCTGCGCAGCATCGAGACGGTGCTTCGCCAGGAGCCCAACGCCATCACCATCTTCGCGCGCGACGTGCTGGCCGGCATGGAGCACACGGGCCACTCGGCCGCGCTCCCCTACCGGCTGAGCTGGAACCTGCCGCCGGTGAGCTTCTTCACGCTGAAGGAACTCGAAGCGCACCCTACGGTGCGATCGCTGCGCGGCGCGGTGGTCGAGACCGCGCTGCGCATGAAGCGGCCGGTGGCCTGA
PROTEIN sequence
Length: 324
LPTARDPAVELHRTLLSRLKLRQLSLLQAIDRHRTLSRVATEMQLSQPAITKALHEVEDIFGSTLFERSSRGLVPTAAGDAVLHYARRWLAELEATTRVLTSLEAGRSGRLRLGFTQQVPQQLMSAALTHLLDRSPRISVMVREGTTDELVACLVARELDCAIGRSYDGDASGLVQEAIHEQEPCLVVGAKNVKRLSRGPLDWARLAQLDWILPPPNTPMRRTYNAIFVGAGVQPPLPILETTALRSIETVLRQEPNAITIFARDVLAGMEHTGHSAALPYRLSWNLPPVSFFTLKELEAHPTVRSLRGAVVETALRMKRPVA*