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SCNpilot_cont_300_bf_scaffold_329_curated_9

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(11713..12057)

Top 3 Functional Annotations

Value Algorithm Source
Putative branched-chain amino acid transport protein, AzlD family n=1 Tax=Variovorax paradoxus B4 RepID=T1XE10_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 113.0
  • Bit_score: 221
  • Evalue 4.00e-55
putative branched-chain amino acid transport protein, AzlD family similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 113.0
  • Bit_score: 221
  • Evalue 1.30e-55
Putative branched-chain amino acid transport protein, AzlD family {ECO:0000313|EMBL:AGU50793.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 113.0
  • Bit_score: 221
  • Evalue 5.70e-55

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 345
ATGCACCTGGGTCACGATGTGTACGTGTGGCTGGCGGTGGGCGCGCTGGTGGGGGTGACGGTGCTCACGCGCAGTTTTTTCCTGCTGCCCGACAGCGAGCCGAAGCTGCCGGGCTGGTTGTGGCGCGGGCTGCGCCATGCGCCGGTGGCGGCGCTGCTCGCGATGGTGGTGCCCGACGTGTTCCTGAGCAACGGCCGCATGCTGGCCGACTGGCACGATGCGCGGCTCTTTGCAGTGGCCGCCGCATTGACCTACTACCTCGTTCGACGAAACGACGTGACCGGGACGATTCTTGTCGGCACGGGTACGCTGATGCTTCTGCGACTGGGGTTCGGGTGGGCTTGA
PROTEIN sequence
Length: 115
MHLGHDVYVWLAVGALVGVTVLTRSFFLLPDSEPKLPGWLWRGLRHAPVAALLAMVVPDVFLSNGRMLADWHDARLFAVAAALTYYLVRRNDVTGTILVGTGTLMLLRLGFGWA*