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SCNpilot_cont_300_bf_scaffold_329_curated_36

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 43119..43955

Top 3 Functional Annotations

Value Algorithm Source
LytR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00035C5EF5 similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 277.0
  • Bit_score: 487
  • Evalue 9.50e-135
LytTR family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 282.0
  • Bit_score: 482
  • Evalue 7.40e-134
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ADU38328.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 282.0
  • Bit_score: 482
  • Evalue 3.30e-133

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 837
ATGACCCCGACCGCCCTCATTGCCGAAGACGAGCCCCTGCTCGCACAAGCCCTCAAGGCCGAACTGGCCGCCGCCTGGCCCGAACTGCAGGTGGTCGCCACCGCCGGCGACGGCCGCAGCGCCGTGCGCGAGGCGCTGCGCCTGCTGCCGCAGGTGCTGTTCTTCGACATTCGCATGCCCGGCCTGGACGGCCTGGGCGCCGTCGCCGAACTGGCCGACTGCTGGCCGACCGACCAGGCGCCGATGCCGCAGCTGGTGTTCGTCACCGCCTACGACGAATACGCCGCGCGCGCCTTCGAGGCCCAGGCCATCGACTACGTGCTCAAGCCGGTGCAGCCCGAGCGGCTGCGCAAGACCGTGGCCCGGCTGCGGCAGGCGCTGGCCGCCCCGCAGCCTTCAGCCACGCCCGCCGTCGCCGACGAAGCGCTCGAACGCACGCTTGCCCAGTGGCGCCAGGTGCTGGCCGCCGCGGGCGCCGGCGCCGAAACGGTCGCGCCGCCCACCGCCCCGCTGCGCATGATTGCCGCCAGCGACGCCGGCGGCAGCACCGTGCGCATGGTGCCCGTCGACGAGGTTCTGTATTTCGAGGCTGCGGACAAATACCTGCGCGTGCTGACCGCCACGCACGAATACCTGATCCGCACGCCGCTGAAGCAGCTGCTGCCCCAGCTCGACGCCGACACCTTCTGGCAGGTGCACCGGGCGGTGGTGGTGCGCAGCGCGGCCATCGAGTCGGTGCACCGCGACGAAGCCGGCAAGATGCACCTGATACTGCGCGGGCGGCCCGAGAAGATTCCGGTCAGCCGCCTCTATGCCCATCTGTTTCGCGCCATGTGA
PROTEIN sequence
Length: 279
MTPTALIAEDEPLLAQALKAELAAAWPELQVVATAGDGRSAVREALRLLPQVLFFDIRMPGLDGLGAVAELADCWPTDQAPMPQLVFVTAYDEYAARAFEAQAIDYVLKPVQPERLRKTVARLRQALAAPQPSATPAVADEALERTLAQWRQVLAAAGAGAETVAPPTAPLRMIAASDAGGSTVRMVPVDEVLYFEAADKYLRVLTATHEYLIRTPLKQLLPQLDADTFWQVHRAVVVRSAAIESVHRDEAGKMHLILRGRPEKIPVSRLYAHLFRAM*