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SCNpilot_cont_300_bf_scaffold_200_curated_21

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 18165..19313

Top 3 Functional Annotations

Value Algorithm Source
pyridoxaL-5'-phosphate-dependent protein beta subunit; K01733 threonine synthase [EC:4.2.3.1] similarity KEGG
DB: KEGG
  • Identity: 84.9
  • Coverage: 385.0
  • Bit_score: 651
  • Evalue 1.30e-184
threonine synthase n=1 Tax=Variovorax paradoxus RepID=UPI0003796691 similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 381.0
  • Bit_score: 686
  • Evalue 1.90e-194
Variovorax paradoxus strain MEDvA23 contig_25, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ32843.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 380.0
  • Bit_score: 666
  • Evalue 2.90e-188

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1149
ATGGTCCGAGACCGAACGCCCAAGCCCCTGCGGAACCCACGCCTGCGCGGGCTGCAGTGCCTGCGATGCGATGCGCTCTACCCGATCACGCTCACGCACGACGGCTGTTCGGCCTGCAAGCGCGAGGGCGTTCATGTCGCGCTGCGCGCCAGCTACCTGCCCGACGGCCCGGTGGAAGCGATGCCCATGCCCTATGCGCCCGGCTTCACGCTGGGGGAGGGCAACACGCCGCTGCAGCAGATGCCCGAGCTGGCAAAGCAGTTCGGCGTGGCCAGCCTGGCGCTCAAGGACGAGTCCTGCAATCCGACCGGCTCGCACAAGGACCGCATGACCGCCGTGGGCGTGGCTCAGGCCTTCGACTTCGATGCGCACACGCTGGTGCTGGCCTCGTCGGGCAACGCGGCGGTGTCTGCGGCGCACTACGCCTGGGCCGCGGGCCTGGGCTGCGAGGTGGCCACCTACGAGGGCATGCCGGCCACCTATGCGCGGCAGCTCGATGCGCTGGGCGCGCGGCGCTATGTGTTCGCCGACAACGCGGGCCGCTGGGCCTTCGTGCGCGAGCGTTCGCAGTACCCCGGCTACTTCGCGCTCACCAACTACCGCCTGCCGGCTCTGGGCAGCGCGCCGCTGGCCATAGAAGGCTACAAGCCCATCGCCCTCGAATGCGTGACCGACGGCGGCCTGCCCGATCACATCGTGATTCCCACCGCGCGGGGCGACCTGGCGTGGGGCATCTACGCGGGCTTTCGCGACCTGCTGGCGGCGGGGCGCATTGCACGGCTGCCCAAGTTGTGGCTCGTGGAGCCCTTCGCGCGGCTGTCGTGCGTGCAGGCGGGCGGCGCGATCAATGGCAGCTACCCCGGCCACACCGCGCAGTTCTCGACCGCCGGCGCCACCGTGACCTACCTGCAATGGCAGGCCGCGACCGCCACCGGCGGCAGTGCCGTGGTGGTGGGCGACGAAGAGGCCCGCGCCGCACGCCGCCTGCTCACCGCCGCCGGCGTGAGCGCCGAGCTGTGTTCCGCCGGCAGCCTTGCCGCGCTGAAGCAGCTGCGCGAGAGCAACGCCATCGAGGCCGGCTCGCGCGTGGTGCTGATGCTGACCGCCAGCGCGTCGAGCGATCCGAGCTGGCCCGATCCCGCACCCTGA
PROTEIN sequence
Length: 383
MVRDRTPKPLRNPRLRGLQCLRCDALYPITLTHDGCSACKREGVHVALRASYLPDGPVEAMPMPYAPGFTLGEGNTPLQQMPELAKQFGVASLALKDESCNPTGSHKDRMTAVGVAQAFDFDAHTLVLASSGNAAVSAAHYAWAAGLGCEVATYEGMPATYARQLDALGARRYVFADNAGRWAFVRERSQYPGYFALTNYRLPALGSAPLAIEGYKPIALECVTDGGLPDHIVIPTARGDLAWGIYAGFRDLLAAGRIARLPKLWLVEPFARLSCVQAGGAINGSYPGHTAQFSTAGATVTYLQWQAATATGGSAVVVGDEEARAARRLLTAAGVSAELCSAGSLAALKQLRESNAIEAGSRVVLMLTASASSDPSWPDPAP*