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SCNpilot_cont_300_bf_scaffold_200_curated_22

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 19330..20310

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZX4_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 326.0
  • Bit_score: 576
  • Evalue 1.80e-161
Variovorax paradoxus strain MEDvA23 contig_25, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ32800.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.6
  • Coverage: 326.0
  • Bit_score: 583
  • Evalue 1.60e-163
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 88.0
  • Coverage: 326.0
  • Bit_score: 576
  • Evalue 5.80e-162

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 981
ATGCCGACGATGAATCGCCGGGCCGTTCTGGCCGCCGGCCCCGCGACCCTGCTCGCCGTAAGCCTGCCCGCCTGGGCTGCCTACCCCGACAAGCCGATCAAGCTCGTCGTGCCGTGGGCCGCGGGCGGCAGCACCGACGCCATCGCGCGGGCGATGGCGCAGCGCATGAGCCAGACCATCGGCAGCCCGGTGATCGTGGACAACAAGCCCGGCGCCGCCGGCATGATCGGCACCGACGCCGCCGCCAAGGCCGCGCCCGACGGCTACACCATCGCCATCGTCGAGCTGCCGCACGCCATCGCGCCGGCGGTGACCGCCAAGCTGCCCTACGACCTGCTGCGCGACTTCACGCCCGTGACCATGATCGGCACGTCGCCGCTGGTGTTCTTCGCGGGCATGGAGGACGACAGCAGGGACTTCAAGACCTTCCTGCGCACGGCCGCCGCCAAGGCCGCGCCGCCGGCCATCGCGCACAGCGGCGCGGGCACGGTGAGCCACCTGGCGGCGGAACTGCTCGCGAGCCGCACGAAGATCAGGTTCAACATGGTTCCGTACCGCGGCTCGGCGCCCGCGCTCACCGACGTGGCCGCCGGCACGGTGGCGGGCCACTTCGCGACGATGGCCAGCGGCTCCAGCCTGCTGGGCGCGAACCGCATCCGGCCGCTGCTGGTGACGAGTACGCAGCGGGTGAACATTCCCGGCCTGCAGAACGTGCCCGCGCTCGCGGAGAACAATCTCCGGGGCCTGGAGATCGACCAGTGGTGGGCCATGGTCGCGCCGGCCACCACGCCGCTGGACGTGATCGAGAAGCTGCGCCGCGAGGCCATTGCCGCCCTCGAGCATGCGTCGGTGAAGGAGCGGCTGTCGGTGCTGGGCGTGCAGATGAAGGGCTCGACGCCGCTGGAATTGCGCGCGTTCCTGCGCGCCGAGGCCGAGCGCTGGCAGAAGGCCGCGCACGAGATCGGCCTGCAGCCCCAGTAG
PROTEIN sequence
Length: 327
MPTMNRRAVLAAGPATLLAVSLPAWAAYPDKPIKLVVPWAAGGSTDAIARAMAQRMSQTIGSPVIVDNKPGAAGMIGTDAAAKAAPDGYTIAIVELPHAIAPAVTAKLPYDLLRDFTPVTMIGTSPLVFFAGMEDDSRDFKTFLRTAAAKAAPPAIAHSGAGTVSHLAAELLASRTKIRFNMVPYRGSAPALTDVAAGTVAGHFATMASGSSLLGANRIRPLLVTSTQRVNIPGLQNVPALAENNLRGLEIDQWWAMVAPATTPLDVIEKLRREAIAALEHASVKERLSVLGVQMKGSTPLELRAFLRAEAERWQKAAHEIGLQPQ*