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SCNpilot_cont_300_bf_scaffold_180_curated_3

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 850..2061

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI0003785212 similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 403.0
  • Bit_score: 745
  • Evalue 2.20e-212
UPF0761 membrane protein RT97_10040 {ECO:0000256|HAMAP-Rule:MF_00672}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 403.0
  • Bit_score: 752
  • Evalue 4.20e-214
ribonuclease bn; K07058 membrane protein similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 403.0
  • Bit_score: 745
  • Evalue 1.20e-212

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1212
ATGATAGCCGCCATGAATCGACGGCAGCTTTGGAGGGATCTTTCGCGTTTTCCGTGGCGCAACACCGCCGCGGTACTGGGCGAGCGTTTCCGCGAAGACAAGCTCGGCCTCACGGCCAGCAGCCTGACCTTCACCACCACCATCGCGATGGTTCCCTTCTTCACGGTGGCGCTGGCGCTGTTCACCGTGTTCCCGATGTTCGCCAAGATGCAGGGCCGGCTGCAGCGCTGGCTGATCGAGAGCCTGATTCCCGACAACATCGCGCGCCAGGTGCTCGGCTACCTGAACCAGTTCGCGAGCAAGGCCAGCGGGCTGGGCATCGCGGGCCTGATCGTGCTGCTGATCACCGCCATCGCGCTGATCCTCACCATCGACAAGACGCTCAACAACATCTGGCGCGTGCGCTCGCCGCGCCCGTTCGCGCAGCGGGTGCTGATCTACTGGGCGACCATCACGCTGGGGCCGCTGATCCTGGCGGTGAGCCTGTCGACCACCTCCTATGTGTTCTCGGCCTCGCGCGACGTGGTGGGCGGCACCATGGTCAAGCTGGCCTTCGACAGCCTCGAATTCATGCTGCTCGCGGCCGGCATGGCCTCGCTCTACCACTACGTGCCCAACACCAACGTGCGCTGGGCGCATGCCTGGGCCGGCGGCATCTTCGTGGCGGCGGCCATCGAGATCGCCAAGCGCGTGCTGGCCTATTACCTGAGCCTGGTGCCGACCTATTCGGTGCTGTACGGCGCCTTCGCCACCTTCCCGATCCTGCTGGTGTGGATCTACGTGGCCTGGGTGATCGTGCTGCTGGGCGCGGTCATCGCGGCCTACCTGCCGAGCCTGCTGACGGGGGTGGCGCGGCGCGGCGGCACCGCCGGCTGGCCGCTGCAACTGGCGATGGAATCGCTGCAGCACCTGGCCCGCGCGCGCGCCACGCCGGCCAAGGGCATGGGCGCGGCCGAACTGGTGGCGCGCATGCGGGTCGATTCGCTGCAGCTCGCGCCGGTGCTCGAGACGCTGGTGGCGCTCGACTGGATCGCGCCGCTGGCGGAAGAGCCCGCCAACGAAGACCCGCGCTACGTGCTCCTTGCCGACCCCTCGACGCCCATCGAGCCGCTGCTGAAGGAGCTGCTGATGCCGCGGGCCGAGCCGCTCGAAGACCTCTGGCAGAAGGGGCCGCTGCGCTCCCTGAGGCTGGGCGACGTGCTCTTGATCTAG
PROTEIN sequence
Length: 404
MIAAMNRRQLWRDLSRFPWRNTAAVLGERFREDKLGLTASSLTFTTTIAMVPFFTVALALFTVFPMFAKMQGRLQRWLIESLIPDNIARQVLGYLNQFASKASGLGIAGLIVLLITAIALILTIDKTLNNIWRVRSPRPFAQRVLIYWATITLGPLILAVSLSTTSYVFSASRDVVGGTMVKLAFDSLEFMLLAAGMASLYHYVPNTNVRWAHAWAGGIFVAAAIEIAKRVLAYYLSLVPTYSVLYGAFATFPILLVWIYVAWVIVLLGAVIAAYLPSLLTGVARRGGTAGWPLQLAMESLQHLARARATPAKGMGAAELVARMRVDSLQLAPVLETLVALDWIAPLAEEPANEDPRYVLLADPSTPIEPLLKELLMPRAEPLEDLWQKGPLRSLRLGDVLLI*